Job Description P32132 Confidence 97.79% Date Thu Jan 5 11:49:17 GMT 2012 Rank 277 Aligned Residues 148 % Identity 20% Template c2hxsA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-28; PDBTitle: crystal structure of rab28a gtpase in the inactive (gdp-3'p-2 bound) form Resolution 1.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	.	.	.	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	G
Query Conservation																																																															.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	V	L	G	D	G	A	S	G	K	T	S	L	T	T	C	F	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	F	G	K	Q	Y	K	Q	T	I	G	L	D	F	F	L	R	R	I	T	L	P	G	N	L	N	V	T	L	Q	I	W	D	I	G	G	Q	T	I	G	G	K
Template Known Secondary structure									T	T	S	S										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T						T	T	T	S	S									T	T	T											T	T			T	T		T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																				.	.
Query SS confidence																																					.	.	.	.	.	.	.																				.	.
Query Sequence		E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	.	.	.	.	.	.	.	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R	P	.	.	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T
Query Conservation																																					.	.	.	.	.	.	.																				.	.
Alig confidence																																					.	.	.	.	.	.	.																				.	.												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		M	L	D	K	Y	I	Y	G	A	Q	G	V	L	L	V	Y	D	I	T	N	Y	Q	S	F	E	N	L	E	D	W	Y	T	V	V	K	K	V	S	E	E	S	E	T	Q	P	L	V	A	L	V	G	N	K	I	D	L	E	H	M	R	T	I	K	P	E	K	H	L	R	F	C	Q	E	N	.	.	.	.	.	.
Template Known Secondary structure		T						T	T		S								T	T							T																T												G	G	G	G	G	G		S	S													.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	F	S	S	H	F	V	S	A	K	T	G	D	S	V	F	L	C	F	Q	K	V
Template Known Secondary structure		.	.	.	.	T								T	T	T		T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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