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Job DescriptionP32132
Confidence97.60%DateThu Jan 5 11:49:17 GMT 2012
Rank292Aligned Residues144
% Identity14%Templatec2hupB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:ras-related protein rab-43; PDBTitle: crystal structure of human rab43 in complex with gdp
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  EKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFG
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Template Sequence  DFLFKLVLVGDASVGKTCVVQRFKTGA. . . . . . . . . . . . . . . . . . . . . . . . . . . FDFTMKTLEIRVKLQIWDTAGQERFR
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   16...20.........30.........40.. .......50.........60........
 
   83......90.........100.........110 .........120.........130.........140.........150........
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Query Sequence  GEVERVMSMVDSVLLVVDAFDGPMPQTR. . . . FVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQL
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Template Sequence  TITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAE. . . . . . . HYD
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   82.......90.........100.........110.........120.........130.........140.........150. ...
 
   159160.........170.........180
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Query Sequence  DFPIVYASALNGIAGLDHEDMA
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Template Sequence  ILCAIETSAKDSSNVEEAFLRV
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   155....160.........170......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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