Job Description P32132 Confidence 98.50% Date Thu Jan 5 11:49:17 GMT 2012 Rank 173 Aligned Residues 161 % Identity 21% Template c2fg5A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-31; PDBTitle: crystal structure of human rab31 in complex with a gtp2 analogue Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	L	R	N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F
Query Conservation
Alig confidence						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	E	L	.	K	V	C	L	L	G	D	T	G	V	G	K	S	S	I	V	C	R	F	V	Q	D	H	F	D	H	N	I	S	P	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	F	M	T	K	T	V	P	C	G	N	E	L	H	K	F	L	I	W	D	T	A	G	Q	E	R	F
Template Known Secondary structure						.								T	T	S	S															T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											S	S	S												S	G	G	G
Template Predicted Secondary structure						.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	.	.	.	.	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		H	S	L	A	P	M	Y	Y	R	G	S	A	A	A	V	I	V	Y	D	I	T	K	Q	D	S	F	Y	T	L	K	K	W	V	K	E	L	K	E	H	G	P	E	N	I	V	M	A	I	A	G	N	K	C	D	L	S	D	I	R	E	V	P	L	K	D	A	K	E	Y	A	E	.	.	.	.	.	.	.	.	S
Template Known Secondary structure		G	G	G	T					T	T		S								T	T		T																	S		T	T										G	G	G	G	G	G			S											.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	A	I	V	V	E	T	S	A	K	N	A	I	N	I	E	E	.	.	.	.	.	.	.	.	.	.	L	F	Q	G	I	S	R	Q	I	P
Template Known Secondary structure		T	T							B	T	T	T	T	B	S				.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions