Job Description P32132 Confidence 97.75% Date Thu Jan 5 11:49:17 GMT 2012 Rank 280 Aligned Residues 155 % Identity 16% Template c2f9lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rab11b, member ras oncogene family; PDBTitle: 3d structure of inactive human rab11b gtpase Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	E	K	L	R	N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Y	D	Y	L	F	K	V	V	L	I	G	D	S	G	V	G	K	S	N	L	L	S	R	F	T	R	N	E	F	N	L	S	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	E	F	A	T	R	S	I	Q	V	D	G	K	T	I	K	A	Q	I	W	D	T	A	G	Q	E	R
Template Known Secondary structure				S									S	S	T	T	S	S											S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T											S	S	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		F	G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	.	.	.	.	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Y	R	R	I	T	S	A	Y	Y	R	G	A	V	G	A	L	L	V	Y	D	I	A	K	H	L	T	Y	E	N	V	E	R	W	L	K	E	L	R	D	H	A	D	S	N	I	V	I	M	L	V	G	N	K	S	D	L	R	H	L	R	A	V	P	T	D	E	A	R	A	F	A	E	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T								T	T		S								T	T							T												S		T	T										T	T		G	G	G			S											.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	N	L	S	F	I	E	T	S	A	L	D	S	T	N	V	E	E	A	F	K	N	I
Template Known Secondary structure			T	T								T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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