Job Description P32132 Confidence 100.00% Date Thu Jan 5 11:49:17 GMT 2012 Rank 19 Aligned Residues 321 % Identity 24% Template c1wb1C_ PDB info PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp Resolution 3.0 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	L	R	N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F
Query Conservation
Alig confidence						.																												.	.	.	.	.	.	.	.	.
Template Conservation						.																												.	.	.	.	.	.	.	.	.
Template Sequence		F	K	N	I	.	N	L	G	I	F	G	H	I	D	H	G	K	T	T	L	S	K	V	L	T	E	I	A	S	T	S	A	.	.	.	.	.	.	.	.	.	H	D	K	L	P	E	S	Q	K	R	G	I	T	I	D	I	G	F	S	A	F	K	L	E	N	Y	R	I	T	L	V	D	A	P	G	H	A	D	L
Template Known Secondary structure			B			.								T	T	S	S	T	T							T	T	T	S	S		S	S	.	.	.	.	.	.	.	.	.		S	S	S	S	T	T	T	T	S						S	S							T	T									S	S	S
Template Predicted Secondary structure						.																												.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P
Query Conservation
Alig confidence																																																																								.	.
Template Conservation																																																																								.	.
Template Sequence		I	R	A	V	V	S	A	A	D	I	I	D	L	A	L	I	V	V	D	A	K	E	G	P	K	T	Q	T	G	E	H	M	L	I	L	D	H	F	N	I	P	I	I	V	V	I	T	K	S	D	N	A	G	T	E	E	I	K	R	T	E	M	I	M	K	S	I	L	Q	S	.	.	T	H	N	L	K	N	S	S
Template Known Secondary structure								S		S	S										T	T	T																T	T											T	T	S																			.	.	S	S	G	G	G	G
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P	A	P	D	.	.	V	D	L	D	G	P	F	Q	M	Q	I	S	Q	L	D	Y	N	S	Y	V	G	V	I	G	I	G	R	I	K	R	G	K	V	K	P	N	Q	Q	V	T	I
Query Conservation																																							.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	P	I	S	A	K	T	G	F	G	V	D	E	.	.	.	.	.	.	.	.	.	.	L	K	N	L	I	I	T	T	L	N	N	A	E	I	I	R	N	T	E	S	Y	F	K	M	P	L	D	H	A	F	P	I	K	G	A	G	T	V	V	T	G	T	I	N	K	G	I	V	K	V	G	D	E	L	K	V
Template Known Secondary structure							T	T	T	T	T	T				.	.	.	.	.	.	.	.	.	.										T	T	S							S	S													T	T	T										B	S				S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		I	D	S	E	G	K	T	R	N	A	K	V	G	K	V	L	G	H	L	G	L	E	R	I	E	T	D	L	A	E	A	G	D	I	V	A	I	T	.	.	.	.	G	L	G	E	L	N	I	S	D	T	V	C	D	T	Q	N	V	E	A	L	P	A	L	S	V	D	E	P	T	V	S	M	F	F	C	V	N	T
Query Conservation																																								.	.	.	.
Alig confidence						.	.	.											.	.	.	.																		.	.	.	.
Template Conservation						.	.	.											.	.	.	.
Template Sequence		L	P	I	N	.	.	.	M	S	T	K	V	R	S	I	Q	Y	.	.	.	.	F	K	E	S	V	M	E	A	K	A	G	D	R	V	G	M	A	I	Q	G	V	D	A	K	Q	I	Y	R	G	I	L	T	S	K	D	T	K	L	Q	T	V	D	K	I	V	A	K	I	K	I	S	D	I	F	K	Y	N	L	T
Template Known Secondary structure		T	T	T	T	.	.	.											.	.	.	.	S	S	S			S				S	S									S	S		G	G	G									T	T															B		T	T			S	B
Template Predicted Secondary structure						.	.	.											.	.	.	.
Template SS confidence
		221	.	.	.				.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	F	C	G	K	E	G	K	F	V	T	S	R	Q	I	L	D	R	L	N	K	E	L	V	H	N	V	A	L	R	V	E	E	T	E	D	A	D	A	F	R	V	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	P	K	M	K	V	H	L	N	V	G	M	L	I	V	P	A	V	A	V	P	F	K	K	V	T	F	G	K	T	E	E	N	I	I	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S	S								T	T																S	S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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