Job Description P32132 Confidence 100.00% Date Thu Jan 5 11:49:17 GMT 2012 Rank 33 Aligned Residues 267 % Identity 24% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																			.	.																										.
Query SS confidence																																			.	.																										.
Query Sequence		N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	.	.	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	.	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	G
Query Conservation																																			.	.																										.
Alig confidence																																			.	.																										.
Template Conservation
Template Sequence		N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	F	L	R	R	V	S	F	V	D	S	P	G	H	E	T	L	M	A
Template Known Secondary structure							S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B													S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																								.																	.															.
Query SS confidence																								.																	.															.
Query Sequence		E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	.	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	.	K	P	I	V	V	I	N	K	V	D	R	P	G	A	.	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F
Query Conservation																								.																	.															.
Alig confidence																								.																	.															.																					.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E	F	V	K	G	T	I	A	E	N	.	.	.	.	A
Template Known Secondary structure					T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T	T										T	T	S	T	T	T	T	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P	A	P	D	V	D	L	D	G	P	F	Q	M	Q	I	S	Q	L	D	.	.	.	.	.	.	.	.	Y	N	S	Y	V	G	V	I	G	I	G	R	I	K	R	G	K	V	K
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	I	P	I	N	I	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	A	I	Q	D	F	I	P	T	P	K	R	D	P	D	A	T	P	R	M	Y	V	A	R	S	F	D	I	N	K	P	G	T	E	I	K	D	L	K	G	G	V	L	G	G	A	I	I	Q	G	V	F	K
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S							T	T	S															S	S			G	G	G													S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210																	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																															.	.	.	.	.				.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.																															.	.	.	.	.				.	.
Query Sequence		P	N	Q	Q	V	T	I	I	D	S	E	G	K	T	R	.	.	.	.	.	.	.	.	.	N	A	K	V	G	K	V	L	G	H	L	G	L	E	R	I	E	T	D	L	A	E	A	G	D	I	V	A	I	T	.	.	.	.	.	G	L	G	.	.	E	L	N	I	S	D	T	V	C	D	T	Q	N	V	E	A
Query Conservation																	.	.	.	.	.	.	.	.	.																															.	.	.	.	.				.	.
Alig confidence																	.	.	.	.	.	.	.	.	.											.	.	.	.																	.	.	.	.	.				.	.
Template Conservation																																				.	.	.	.
Template Sequence		V	G	D	E	I	E	I	R	P	G	I	K	V	T	E	G	N	K	T	F	W	K	P	L	T	T	K	I	V	S	L	A	A	G	.	.	.	.	N	T	I	L	R	K	A	H	P	G	G	L	I	G	V	G	T	T	L	D	P	Y	L	T	K	S	D	A	L	T	G	S	V	V	G	L	P	G	T	L	P	P
Template Known Secondary structure		T	T														T	T																	T	.	.	.	.	T				S				S	S	S							S	S		G	G	G	T	G	G	G	T	T	T	T					S	T	T		S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		297
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		348

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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