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Job DescriptionP32132
Confidence98.42%DateThu Jan 5 11:49:17 GMT 2012
Rank183Aligned Residues152
% Identity20%Templatec1gwnA_
PDB info PDB header:gtpaseChain: A: PDB Molecule:rho-related gtp-binding protein rhoe; PDBTitle: the crystal structure of the core domain of rhoe/rnd3 - a2 constitutively activated small g protein
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVER
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Template Sequence  IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT. . . . . . . . . . . . . . . ASFEIDTQRIELSLWDTSGSPYYDNVRPL
Template Known Secondary structure  STTSSS


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S...............SSSS

SGGGTTTGGG
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   26...30.........40.........50.........60. ........70.........80.........90
 
   88.90.........100.........110..... ....120.........130.........140... ......150..
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Query Sequence  VMSMVDSVLLVVDAFDGPMPQTRFVTKK. . . . AFAYGLKPIVVINKVDRPGARPDWVVDQ. . . . . . . . . . . VFDLFVNLD
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Template Sequence  SYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIG
Template Known Secondary structure  G
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GGGGG
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   153......160.........170. ........180
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Query Sequence  ATDEQLDFPIVYASALNGI. AGLDHEDMA
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Template Sequence  AA. . . . . . TYIECSALQSENSVRDIFHVA
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TTT
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   171. .......180.........190...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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