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Job DescriptionP32132
Confidence95.38%DateThu Jan 5 11:49:17 GMT 2012
Rank350Aligned Residues107
% Identity20%Templatec1f5nA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  EKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFG
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Template Sequence  QPMVVVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTK. . . . . . . . . GIWMWCVPHPK. KPGHILVLLDTEGLGDVE
Template Known Secondary structure  SBBTTSSTT
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S



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B

GG
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   36...40.........50.........60.........70...... ...80....... ..90.........100.....
 
   83......90.........100.........110.........
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Query Sequence  . . . . . . GEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAY
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Template Sequence  KGDNQNDSWIFALAVLLSSTFVYNSIGTINQQAMDQLYYVTEL
Template Known Secondary structure  G


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   106...110.........120.........130.........140........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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