 |
Job Description | P76546 | Confidence | 28.50% | Date | Thu Jan 5 12:24:22 GMT 2012 |
Rank | 52 | Aligned Residues | 61 |
% Identity | 13% | Template | d1zk8a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.15 |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | A | T | Q | I | V | L | L | V | S | . |
E | G | Y | S | L | R | K | I | S | M | M | P | G | M | P | S | H | R | Q | M | M | R | W | Q | L | E | H | M | D | F | R | E | G | I | A | W | M | S | W | L | W | C | A | E | A | G | R | R | A | V | E |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|
|
| . |   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |
|
| . |
|   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
E | T | A | A | E | I | A | D | A | N | G | V | Q | E | V | T | L | A | S | L | A | Q | T | L | G | V | . |
R | S | P | S | L | Y | N | H | V | K | G | L | Q | D | V | R | K | N | L | G | I | Y | G | I | K | K | L | H | N | R | L | E | E | A | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T | S | . |
|  |  |  |  | T | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|