 |
Job Description | P76546 | Confidence | 26.63% | Date | Thu Jan 5 12:24:22 GMT 2012 |
Rank | 56 | Aligned Residues | 46 |
% Identity | 15% | Template | d1p4wa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | UNK |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | G | R | P | A | K | Y | N | E | K | I | A | T | Q | I | V | L | L | V | S | E | G | Y | S | L | R | K | I | S | M | M | P | G | M | P | S | H | R | Q | M | M | R | W | Q | L | E |
Query Conservation |   |
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|   |
| . |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
A | G | G | Y | G | D | K | R | L | S | P | K | E | S | E | V | L | R | L | F | A | E | G | F | L | V | T | E | I | A | K | K | L | N | R | . |
S | I | K | T | I | S | S | Q | K | K | S |
Template Known Secondary structure |   |
|
|
|
| S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | T | S | . |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | |
. | . | 180 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|