 |
Job Description | P76546 | Confidence | 19.51% | Date | Thu Jan 5 12:24:22 GMT 2012 |
Rank | 79 | Aligned Residues | 32 |
% Identity | 9% | Template | d1fsea_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | 2.05 |
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | V | L | L | V | S | E | G | Y | S | L | R | K | I | S | M | M | P | G | M | P | S | H | R | Q | M | M | R | W | Q | L | E |
Query Conservation |   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |
| . |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
E | V | F | E | L | L | V | Q | D | K | T | T | K | E | I | A | S | E | L | F | I | . |
S | E | K | T | V | R | N | H | I | S | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  | T | S | . |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|