Return to main results Retrieve Phyre Job Id

Job DescriptionP76546
Confidence52.58%DateThu Jan 5 12:24:22 GMT 2012
Rank25Aligned Residues34
% Identity29%Templatec2xroE_
PDB info PDB header:dna-binding protein/dnaChain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.. .......50.........60........
Predicted Secondary structure  ...








Query SS confidence 








. . .

























Query Sequence  ATQIVLLVS. . . EGYSLRKISMMPGMPSHRQMMRWQLE
Query Conservation 




 


... 




 

 




   

 


  
Alig confidence 








...














.









Template Conservation   
 

  
        
 


  


 . 


 


 
Template Sequence  AASIMRALGSHPHGLSLAAIAQLVGLP. RSTVQRIINA
Template Known Secondary structure 
TT
B
SS

.
Template Predicted Secondary structure 









.
Template SS confidence 





































   20.........30.........40...... ...50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions