Return to main results Retrieve Phyre Job Id

Job DescriptionP76546
Confidence87.77%DateThu Jan 5 12:24:22 GMT 2012
Rank10Aligned Residues58
% Identity14%Templatec2elhA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:cg11849-pa; PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.....
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG
Query Conservation     
 

 



 

  





 


 




 

 




   

 


    




Alig confidence 







.































.

















Template Conservation   

   

.


 


 

 


 


 
 
 
 


 


.  


  
 






  
Template Sequence  RMGTKGKR. PLRSLTPRDKIHAIQRIHDGESKASVARDIGV. PESTLRGWCKNEDKLRFM
Template Known Secondary structure 


S

SS.

SS

T

T
.
Template Predicted Secondary structure 






.








.
Template SS confidence 



























































   11....... .20.........30.........40.........50 .........60........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions