Job Description P76546 Confidence 63.50% Date Thu Jan 5 12:24:22 GMT 2012 Rank 23 Aligned Residues 55 % Identity 13% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		S	E	T	P	K	K	R	G	R	P	A	K	Y	N	E	K	I	A	T	Q	I	V	L	L	V	S	E	G	.	.	Y	S	L	R	K	I	S	M	M	P	G	M	P	S	H	R	Q	M	M	R	W	Q	L	E	H	M	D	F	R	E	G	I	A
Query Conservation																														.	.
Alig confidence								.	.	.	.	.																		.	.														.
Template Conservation								.	.	.	.	.																																	.
Template Sequence		M	G	P	K	R	R	.	.	.	.	.	Q	L	T	F	R	E	K	S	R	I	I	Q	E	V	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	.	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R
Template Known Secondary structure					S	S		.	.	.	.	.																		T	T	S										T			.										T
Template Predicted Secondary structure								.	.	.	.	.																																	.
Template SS confidence
		1	.	.	.	.	.						.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions