Job Description P77390 Confidence 98.93% Date Thu Jan 5 12:28:27 GMT 2012 Rank 146 Aligned Residues 151 % Identity 13% Template c3op1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae Resolution 2.49 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	K	I	G	C	I	V	M	N	A	N	P	F	T	N	G	H	R	Y	L	I	Q	Q	A	A	A	Q	C	D	W	L	.	.	.	.	H	L	F	L	V	K	E	D	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	P	Y	E	D	R	L	D	L	V	L	K	G	T	A	D	I	P	R	L
Query Conservation																																		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		P	S	D	S	V	V	V	L	G	Y	F	D	G	I	H	K	G	H	Q	E	L	F	R	V	A	N	K	A	A	R	K	D	L	L	P	I	V	V	X	T	F	N	E	S	P	K	I	A	L	E	P	Y	H	P	D	L	F	L	H	I	L	N	P	A	E	R	E	R	K	L	K	R	E	.	.	.	G	V	E	E
Template Known Secondary structure			S							S			S	S																S	S	T	T										S	S		T					S				G	G	G	G		B	S	S													.	.	.	T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	H	R	G	S	E	Y	I	I	S	R	A	T	F	P	C	Y	F	I	K	E	Q	S	V	I	N	H	C	Y	T	E	I	D	L	K	I	F	R	Q	Y	L	A	P	A	L	G	V	T	H	R	F	V	G	T	E	P	F	C	R	V	T	A	Q	Y	N	Q	D	M	R	Y	W	L	E	T	P	T	I	S	A
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		L	Y	L	L	D	F	S	S	Q	F	A	S	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	F	F	A	T	Y	I	K	A	X	N	A	K	I	I	V	A	G	F	D	Y	T	F	G	S	D	K	K	T	A	E	D	L	K	N	Y	F	D	.	.	.	.	.	.
Template Known Secondary structure													T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T								T	T			B	T	T	T	T	B		S	T	T						S	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.																					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	I	E	L	V	E	I	E	R	L	R	Y	Q	E	M	P	I	S	A	S	R	V	R	Q	L	L	A	K	N	D	L	T	A	I	A	P	L	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	E	V	I	I	V	P	P	V	E	D	E	K	G	K	I	S	S	T	R	I	R	Q	A	I	L	D	G	N	V	K	E	A	G	K	L	L
Template Known Secondary structure		.	.	S									B		S	S		B													T
Template Predicted Secondary structure		.	.
Template SS confidence
				147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions