|   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | K | I | G | C | I | V | M | N | A | N | P | F | T | N | G | H | R | Y | L | I | Q | Q | A | A | A | Q | C | D | W | L | H | L | F | L | V | K | E | D | S | S | R | F | P | Y | E | D | R | L | D | L | V | L | K | G | T | A | D | I | P | R | L | T | V | H | R | G | S | E | Y | I | I | S | R | A | T | F | P | C | Y |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|   |
|
|
|
|   |
|
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
R | K | I | A | L | F | P | G | S | F | D | P | M | T | N | G | H | L | N | L | I | E | R | S | A | K | L | F | D | E | V | I | I | G | V | F | I | L | . |
. |
. |
. |
F | T | P | E | E | K | K | Y | L | I | E | E | A | T | K | E | M | P | N | V | R | V | I | M | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | K | E | Q | S | V | I | N | H | C | Y | T | E | I | D | L | K | I | F | R | Q | Y | L | A | P | A | L | G | V | T | H | R | F | V | G | T | E | P | F | C | R | V | T | A | Q | Y | N | Q | D | M | R | Y | W | L | E | T | P | T | I | S | A | P | P | I | E | L | V | E | I | E | R | L | R | Y | Q | E | M | P | I |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|
Template Sequence |   |
. |
. |
. |
E | T | Q | L | T | V | E | S | A | K | S | L | G | A | N | F | . |
. |
. |
. |
L | I | R | G | I | R | N | V | K | D | Y | E | Y | E | K | D | I | A | K | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | Q | H | L | A | P | E | I | E | T | V | F | L | L | . |
A | E | E | P | Y | A | H | V |
Template Known Secondary structure |   |
. | . | . |
| S |
|
|  |  |  |  |  |  |  | T | T |
|
|  | . | . | . | . |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
| T | T | S |  |  |  |  |  |  | . |
|
| G | G | G | T | T |
|
Template Predicted Secondary structure |   |
. | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . |
  |
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | S | R | V | R | Q | L | L | A | K | N | D | L | T | A | I | A | P | L | V | P | A | V | T | L | H | Y | L | Q | N |
Query Conservation |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |
|   |   |
| . | . |   |   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
S | S | S | L | L | K | E | V | L | R | F | G | . |
. |
G | D | V | S | D | Y | L | P | P | N | I | Y | H | A | L | K | Q |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | T | . | . |
|
|
| G | G | G | S |
|  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |