Job Description P77390 Confidence 99.51% Date Thu Jan 5 12:28:27 GMT 2012 Rank 62 Aligned Residues 117 % Identity 16% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	N	D	I	F	T	R	V	K	R	S	E	N	K	K	M	A	E	I	A	Q	F	L	H	E	N	D	L	S	V	D	T	T	V	E	V	F	I	T	V	T	R	D	E	K	L	I	A	C	G	G	I	.	.	.	.	.	.	.	.	.	.	A	G	N	I	I	K	C	V	A	I	S	E	S	V	R	G	E
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	.	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P	A	P	K	L	S	G	Q	X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K
Template Known Secondary structure												G	G	G														T	T	T	S	.	T	T											T	T												S			G	G	G													G	G	G	T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		G	L	A	L	T	L	A	T	E	L	I	N	L	A	Y	E	R	H	S	T	H	L	F	I	Y	T	K	T	E	Y	.	.	.	E	A	L	F	R	Q	C	G	F	S	T	L	T	S	V	P	G	V
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		G	I	G	L	Q	L	X	K	H	L	A	T	I	A	I	T	H	N	C	Q	R	L	D	W	T	A	E	S	T	N	P	T	A	G	K	F	Y	K	S	I	G	A	S	L	I	R	E	K	E	Y	Y
Template Known Secondary structure																		T	T										T	T											T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions