Job Description P77390 Confidence 98.85% Date Thu Jan 5 12:28:27 GMT 2012 Rank 150 Aligned Residues 161 % Identity 16% Template c2x0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribf; PDBTitle: crystal structure of modular fad synthetase from2 corynebacterium ammoniagenes Resolution 1.95 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.												180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																									.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	K	K	F	R	H	P	G	N	K	I	G	C	I	V	M	N	A	N	P	F	T	N	G	H	R	Y	L	I	Q	Q	A	A	A	Q	C	D	W	.	.	.	.	L	H	L	F	L	.	.	.	.	.	.	.	.	.	.	.	V	K	E	D	S	S	R	F	P	Y	E	D	R	L	D	L	V	L	K	G	T
Query Conservation																																									.	.	.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																																	.
Template Sequence		G	T	A	A	V	P	K	D	L	D	N	S	A	V	T	I	G	V	F	D	G	V	H	R	G	H	Q	K	L	I	N	A	T	V	E	K	A	R	E	V	G	A	K	A	I	M	V	T	F	D	P	H	P	V	S	V	F	L	P	R	R	A	P	L	G	I	T	T	L	A	E	R	F	A	L	A	E	S	F	.
Template Known Secondary structure		S	G	G	G	S		T	T									S			T	T																			T	T									S	S							S	T	T		S			B	S	S												T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	D	I	P	R	L	T	V	H	R	G	S	.	.	E	Y	I	I	S	R	A	T	F	P	C	Y	F	I	K	E	Q	S	V	I	N	H	C	Y	T	E	I	D	L	K	I	F	R	Q	Y	L	A	P	A	L	G	V	T	H	R	F	V	G	T	E	P	F	C	R	V	T	A	Q	Y	N	Q	D	M	R	Y	W
Query Conservation														.	.
Alig confidence		.	.											.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	I	D	G	V	L	V	I	D	F	T	R	E	L	S	G	T	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	V	E	F	L	L	E	D	T	L	H	A	S	H	V	V	V	G	A	N	F	T	F	G	E	N	A	A	G	T	A	D	S	L	R	Q
Template Known Secondary structure		.	.	T									T	T	T	S	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T									T	T				S	G	G	G
Template Predicted Secondary structure		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				1085	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.																						.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	P	T	I	S	A	P	P	I	E	L	V	E	I	E	R	L	R	Y	Q	E	M	P	I	S	A	S	R	V	R	Q	L	L	A	K	N	D	L	T	A	I	A	P	L	V
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		I	C	Q	S	R	.	.	.	.	.	L	T	V	D	V	I	D	L	L	D	D	E	G	V	R	I	S	S	T	T	V	R	E	F	L	S	E	G	D	V	A	R	A	N	W	A	L
Template Known Secondary structure			T	T	T	T	.	.	.	.	.												T	T				S										T	T
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		1142	.	.	.	.						.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions