Job Description P77804 Confidence 7.04% Date Thu Jan 5 12:32:59 GMT 2012 Rank 79 Aligned Residues 168 % Identity 11% Template c3e8tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:takeout-like protein 1; PDBTitle: crystal structure of epiphyas postvittana takeout 1 Resolution 1.30 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	K	P	L	N	Y	E	Q	K	D	E	K	V	A	F	S	G	G	E	F	Q	L	N	A	D	R	D	G	K	A	I	S	L	S	G	E	A	Q	S	G	R	I	D	A	V	N	E	Y	N	Q	K	V	Q	L	T	F	N	N	L	K	T	D	G	S	S	T	L	A	S	F	G	E	R	V	G	N	Q	K
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	L	D	D	F	A	F	D	L	S	G	L	Q	F	T	L	K	E	G	K	L	K	G	L	K	G	A	V	I	D	N	V	K	W	D	L	K	K	K	N	I	E	V	.	.	.	.	.	.	.	.	.	.	D	F	H	L	D	.	A	T	V	K	G	H	Y	T	A	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure												T	T													G	G	G										T	T	T	T					.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.						.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.	90		.	.	.	.	.	.	.	.	.											100
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																										.											.	.	.
Query SS confidence																																																										.											.	.	.
Query Sequence		L	S	L	E	K	M	T	I	S	V	E	G	K	E	L	A	L	L	E	G	M	E	I	S	G	K	S	D	L	V	N	D	G	K	T	I	N	S	Q	L	D	Y	S	L	N	S	L	K	V	Q	N	Q	D	L	G	S	.	G	K	L	T	L	K	V	G	Q	I	.	.	.	D	G	E	A	W	H	Q	F	S	Q
Query Conservation																																																										.											.	.	.
Alig confidence																																	.																			.	.	.				.											.	.	.
Template Conservation																																	.																			.	.	.
Template Sequence		G	R	I	L	I	L	P	I	T	G	D	G	Q	M	K	L	K	L	K	N	I	H	I	H	L	V	V	S	Y	E	M	.	E	K	D	A	E	G	V	D	H	V	I	F	K	K	Y	T	V	T	.	.	.	F	D	V	K	D	N	A	Q	F	G	L	T	N	L	F	N	G	N	K	E	L	S	D	T	M	L	T
Template Known Secondary structure					T	T																											.				T	T	S													.	.	.												S	S	B	G	G	G
Template Predicted Secondary structure																																	.																			.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	N	A	Q	T	Q	A	L	L	A	Q	P	E	I	A	N	N	P	E	L	Y	Q	E	K	V	T	E	A	F	F	S	A	L	P	L	M	L	K	G	D	P
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		F	L	N	Q	N	W	K	Q	V	S	E	E	F	G	K	.	.	.	.	.	P	V	M	E	A	A	A	K	K	I	F	K	N	I	K	H	F	L	A	K	V	P
Template Known Secondary structure						T											.	.	.	.	.																					S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions