Return to main results Retrieve Phyre Job Id

Job DescriptionP16676
Confidence100.00%DateThu Jan 5 11:35:17 GMT 2012
Rank22Aligned Residues229
% Identity29%Templated2pmka1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20.........30.........40.........50.........60.........70... .....
Predicted Secondary structure  ..


























..
Query SS confidence 









. .




























































. .




Query Sequence  IEIANIKKSF. . GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARD. . RKVGF
Query Conservation 
 
  
   
..     
  


 
  


  
 
 








  
 
   
  
 
   
          ..  
  
Alig confidence 









..




























































..




Template Conservation 
   


  
      

  


 
  

   


 








  
 
      
 
   
  
           
  
Template Sequence  ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGV
Template Known Secondary structure  SSTTS

TT

STTSSTTSS

STTTTTS
Template Predicted Secondary structure 
































Template SS confidence 















































































   468.470.........480.........490.........500.........510.........520.........530.........540.......
 
   7980.........90.........100.........110.........120.... .....130.........140.........150......
Predicted Secondary structure 


























..














Query SS confidence 













































. .































Query Sequence  VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMV. . QLAHLADRYPAQLSGGQKQRVALARALAVEPQ
Query Conservation    
   
     
                             
   .. 
          



  


 




   
 
Alig confidence 







.










.
























..































Template Conservation    
     .  

 


   .                        
              

 
  


 




   
 
Template Sequence  VLQDNVLL. NRSIIDNISLA. NPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPK
Template Known Secondary structure 
SS


T.TSB
TT.STT

T
TTSTTGGGSB
STTTT


TT

S
Template Predicted Secondary structure 





.


.
























Template SS confidence 















































































   548.550..... ....560...... ...570.........580.........590.........600.........610.........620.....
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEF
Query Conservation 






   

      
   
  
    
 


 


   
   




 

  


   
   

   
     
  
Alig confidence 



























..













.


































Template Conservation 







  

      
   
     ..
 


 


    
.   
 
  
  
 
   
    
          
 
Template Sequence  ILIFDEATSALDYESEHVIMRNMHKICK. . GRTVIIIAHRLSTV. KNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLY
Template Known Secondary structure 



S


T..TS
SSGGGG.TTSSTT
STT
Template Predicted Secondary structure 








..




.









Template SS confidence 















































































   626...630.........640.........650... ......660....... ..670.........680.........690.........700..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions