 |
Job Description | P16676 | Confidence | 98.92% | Date | Thu Jan 5 11:35:17 GMT 2012 |
Rank | 84 | Aligned Residues | 113 |
% Identity | 18% | Template | d2awna1 |
SCOP info | OB-fold
| MOP-like
| ABC-transporter additional domain
|
Resolution | 2.30 |
|
 |
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | N | R | L | Q | G | T | I | R | G | G | Q | F | H | V | G | A | H | R | W | P | L | G | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | A | Y | Q | G | P | V | D | L | F | L | R | P | W | E | V | D | I | S | R | R | T | S | L | D | S | P | L | P | V | Q | V | L | E | A | S | P | K | G | H | Y | T | Q |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |
|   | . | . |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
K | M | N | F | L | P | V | K | V | T | A | T | A | I | D | Q | V | Q | V | E | L | P | M | P | N | R | Q | Q | V | W | L | P | V | E | S | R | D | V | Q | V | G | A | N | M | S | L | G | I | R | P | E | H | L | L | P | S | . |
. |
D | I | A | D | V | I | L | E | G | E | V | Q | V | V | E | Q | L | G | N | E | T | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
| S | S | T | T |
|
|  |  |  |  |
| B |
|
| T | T |
|
| T | T |
|  |  |  |  |  |  |
| G | G | G | S | B |
| S | . | . | S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
. | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
  |
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | V | Q | P | L | G | W | Y | N | E | P | L | T | V | V | M | H | G | D | D | A | P | Q | R | G | E | R | L | F | V | G | L | Q | H | A | R | L | Y | N | G | D | E | R | I | E | T |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
Template Sequence |   |
I | H | I | Q | . |
I | P | S | I | R | Q | N | L | V | Y | R | Q | N | D | V | V | L | V | E | E | G | A | T | F | A | I | G | L | P | P | E | R | C | H | L | F | R | E | D | G | T | A |
Template Known Secondary structure |   |
 |  |  |  | . |
| T | T | S | S | S |
|  |  |  |  |  |  | S |
|
|
|
|
| T | T |
|  |  |  |  |  |
|
| G | G | G |
|  |  |  |
| T | T | S |
| B |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
316 | . | . | . | |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|