Return to main results Retrieve Phyre Job Id

Job DescriptionP16676
Confidence100.00%DateThu Jan 5 11:35:17 GMT 2012
Rank14Aligned Residues227
% Identity47%Templated1v43a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF
Query Conservation 


 
  
   
     
  


 
  


  
 
 








  
 
   
  
 
   
            
    
Alig confidence 















































































Template Conservation    
    
        

  

  
  


  
 
 








  
 
      
 
   
  
            
 
Template Sequence  VEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVF
Template Known Secondary structure 

TT
TT


TTSSTSS

STT
TTS
GGGGT
Template Predicted Secondary structure 





























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
Query Conservation 
   
     
                             
    
          



  


 




   
 



Alig confidence 

......










......






















































Template Conservation    ...... 

 
 
    ......                    
          

 
  


 

 

   
 



Template Sequence  QH. . . . . . MTVYENIAFPL. . . . . . KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLM
Template Known Secondary structure 

......

TT
......



TT
GGGTTS
TTT

SS
TT

S
Template Predicted Secondary structure 
......




......



















Template SS confidence 















































































   91. .......100... ......110.........120.........130.........140.........150........
 
   161........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 

























Query SS confidence 














































































Query Sequence  DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGE
Query Conservation 


   

      
   
  
    
 


 


   
   




 

  


   
   

   
     
  

 
Alig confidence 














































































Template Conservation 



 


      
   
  
      


  

         
 
 

  
 
   
   

            
 
Template Sequence  DEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGA
Template Known Secondary structure  STTTTS
T
S

STT


SSS

Template Predicted Secondary structure 























Template SS confidence 














































































   167..170.........180.........190.........200.........210.........220.........230.........240.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions