 |
Job Description | P16676 | Confidence | 99.04% | Date | Thu Jan 5 11:35:17 GMT 2012 |
Rank | 82 | Aligned Residues | 106 |
% Identity | 22% | Template | d1oxxk1 |
SCOP info | OB-fold
| MOP-like
| ABC-transporter additional domain
|
Resolution | 1.45 |
|
 |
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | N | R | L | Q | G | T | I | R | G | G | Q | F | H | V | G | A | H | R | W | P | L | G | Y | T | P | A | Y | Q | G | P | V | D | L | F | L | R | P | W | E | V | D | I | S | R | R | T | S | L | D | . |
. |
. |
. |
S | P | L | P | V | Q | V | L | E | A | S | P | K | G | H | Y | T | Q | L | V | V | Q | P | L | G |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   | . | . | . |   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
E | I | N | E | L | E | G | K | V | T | N | E | G | V | V | I | G | S | L | R | F | P | V | S | V | S | . |
. |
. |
S | D | R | A | I | I | G | I | R | P | E | D | V | K | L | S | K | D | V | I | K | D | D | S | W | I | L | V | G | K | G | K | V | K | V | I | G | Y | Q | G | G | L | F | R | I | T | I | T | P | L | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  | S |
|
|
| S | . | . | . | S | S |  |  |  |  |  |  |
| G | G | G |  |  |  |  | S | S |
|
| S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
  |   |
315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | Y | N | E | P | L | T | V | V | M | H | G | D | D | A | P | Q | R | G | E | R | L | F | V | G | L | Q | H | A | R | L | Y | N | G | D | E |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
S | E | E | E | I | F | T | Y | S | . |
. |
. |
D | H | P | I | H | S | G | E | E | V | L | V | Y | V | R | K | D | K | I | K | V | F | E | K |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  | . | . | . | S | S |
|
|
| T | T |
|  |  |  |  |  |  |
| G | G | G |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
320 | . | . | . | . | . | . | . | . | |
|
|
. | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|