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Job DescriptionP16676
Confidence96.80%DateThu Jan 5 11:35:17 GMT 2012
Rank199Aligned Residues125
% Identity18%Templatec3io5B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.... .....50.........60.........70.........80.........90.........100....
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Query Sequence  PSGQMVALLGPSGSGKTTL. LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPR
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Template Sequence  QSG. LLILAGPSKSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAY. . . . . . . . . . . . . . . . . . LRSMGVDPERVIH
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TT
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GGG
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   52.. .....60.........70.........80.........90......... 100.........110..
 
   105....110.........120.........130.........140.........150.........160. ........170.........180.
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Query Sequence  RERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLD. . . EPFGALDAQVRKELRRWLRQ
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Template Sequence  TPVQSLEQLRIDMVNQLDAIER. . . . . . . . . . . . . . . . . . . . . . . . . . GEKVVVFIDSLGNLASKTRAKTMKSLFRIVTP
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   113......120.........130.... .....140.........150.........160......
 
   182.......190.....
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Query Sequence  LHEELKFTSVFVTH
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Template Sequence  YFSTKNIPCIAINH
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   182.......190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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