Job Description P16676 Confidence 100.00% Date Thu Jan 5 11:35:17 GMT 2012 Rank 53 Aligned Residues 293 % Identity 20% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	I	A	N	I	K	K	S	F	G	R	T	Q	V	L	N	D	I	S	L	D	I	P	S	G	Q	M	V	A	L	L	G	P	S	G	S	G	K	T	T	L	L	R	I	I	A	G	L	E	H	Q	T	S	G	H	I	R	F	H	G	T	D	V	S	R	L	H	A	R	D	R	K	V	G	F	V	F	Q
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	C	N	C	E	F	S	L	A	Y	G	A	K	I	L	L	N	K	T	Q	L	R	L	K	R	A	R	R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	.	.	.	.	.	.	.	.	.	.	.	T	Q	E	E	C	R	T	V	Y	V	E	H	D
Template Known Secondary structure													T	T													T	T								S	T	T	S	S										T	T		S	T	T			.	.	.	.	.	.	.	.	.	.	.		T	T	T	S					T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.												.	.	.	.	.	490	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		H	Y	A	L	F	R	H	M	T	V	F	D	N	I	A	F	G	L	T	V	L	P	R	R	E	R	P	N	A	A	A	I	K	A	K	V	T	K	L	L	E	M	V	Q	L	A	.	H	L	A	D	R	Y	P	A	Q	L	S	G	G	Q	K	Q	R	V	A	L	A	R	A	L	A	V	E	P	Q	I	L	L	L
Query Conservation																																																.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	E	S	G	V	G	T	.	.	.	.	.	.	.	.	.	.	.	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	I	S	A	L	S	G	G	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L
Template Known Secondary structure							T	T	S	B							T	T			S		.	.	.	.	.	.	.	.	.	.	.												T								S	B	G	G	G																	T	T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.												.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	E	P	F	G	A	L	D	A	Q	V	R	K	E	L	R	R	W	L	R	Q	L	H	E	E	L	K	F	T	S	V	F	V	T	H	D	Q	E	E	A	T	E	V	A	D	R	V	V	V	M	S	Q	G	N	I	E	Q	.	A	D	A	P	D	Q	V	W	R	E	P	A	T	R	F	V	L	E	F	M	G	E
Query Conservation																																																											.
Alig confidence																								.	.	.	.																																.
Template Conservation																								.	.	.	.
Template Sequence		D	E	P	T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	.	.	G	I	T	S	I	T	I	S	H	D	S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	Y	K	G	N	F	T	E	F	V	K	K	C	P	A	A	K	A	Y	E	E	L	S	N
Template Known Secondary structure			S	T	T	T	T																S	.	.	.	.		S							S										S							T	T							S										G	G	G	G	G	T	T		S	S	G
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.					.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	R	L	Q	G	T	I	R	G	G	Q	F	H	V	G	A	H	R	W	P	L	G	Y	T	P	A	Y	Q	G	P	V	D	L	F	L	R	P	W	E	V	D	I	S	R	R	T	S	L	D	S	P	L	P	V	Q	V	L	E	A	S	P	K	G	H	Y	T	Q	L	V	V	Q	P	L	G	W	Y	N	E	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		T	D	L	.	.	.	.	.	.	.	.	.	.	.	.	E	F	K	F	P	E	P	G	Y	L	E	G	V	K	T	K	Q	K	A	I	V	K	V	T	N	X	E	F	Q	Y	P	G	T	S	K	P	Q	I	T	D	.	.	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T
Template Known Secondary structure		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.											T	T			S	T	T	S		S											T	T		S	S		S				.	.							T	T							S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		643	.	.													.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.			.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	V	M	H	G	D	D	A	P	Q	R	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	N	V	L	T	G	E	L	L	P	T	S	G	E
Template Known Secondary structure							T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions