Job Description P16676 Confidence 100.00% Date Thu Jan 5 11:35:17 GMT 2012 Rank 30 Aligned Residues 229 % Identity 27% Template c2d2fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.
Predicted Secondary structure																																																						.	.																						.	.	.
Query SS confidence																																																						.	.																						.	.	.
Query Sequence		S	I	E	I	A	N	I	K	K	S	F	G	R	T	Q	V	L	N	D	I	S	L	D	I	P	S	G	Q	M	V	A	L	L	G	P	S	G	S	G	K	T	T	L	L	R	I	I	A	G	L	E	H	.	.	Q	T	S	G	H	I	R	F	H	G	T	D	V	S	R	L	H	A	R	D	R	.	.	.	K	V
Query Conservation																																																						.	.																						.	.	.
Alig confidence																																																						.	.																						.	.	.
Template Conservation
Template Sequence		Q	L	E	I	R	D	L	W	A	S	I	D	G	E	T	I	L	K	G	V	N	L	V	V	P	K	G	E	V	H	A	L	M	G	P	N	G	A	G	K	S	T	L	G	K	I	L	A	G	D	P	E	Y	T	V	E	R	G	E	I	L	L	D	G	E	N	I	L	E	L	S	P	D	E	R	A	R	K	G	L
Template Known Secondary structure													T	T													T	T								S	S	S	S	S										T		T	T											T	T				T	T	S								T	T	B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		G	F	V	F	Q	H	Y	A	L	F	R	H	M	T	V	F	D	N	I	A	F	G	L	T	V	L	P	R	R	E	R	P	N	A	A	A	I	K	A	K	V	T	K	L	L	E	M	V	Q	L	A	H	.	.	L	A	D	R	Y	P	A	Q	L	S	G	G	Q	K	Q	R	V	A	L	A	R	A	L	A	V	E
Query Conservation																																																						.	.
Alig confidence																														.																								.	.
Template Conservation																														.
Template Sequence		F	L	A	F	Q	Y	P	V	E	V	P	G	V	T	I	A	N	F	L	R	L	A	L	Q	A	K	L	G	.	R	E	V	G	V	A	E	F	W	T	K	V	K	K	A	L	E	L	L	D	W	D	E	S	Y	L	S	R	Y	L	N	E	G	F	S	G	G	E	K	K	R	N	E	I	L	Q	L	L	V	L	E
Template Known Secondary structure									T	T			S		B														T	.	S																			T			G	G	G	G	G	S	B	T	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		P	Q	I	L	L	L	D	E	P	F	G	A	L	D	A	Q	V	R	K	E	L	R	R	W	L	R	Q	L	H	E	E	L	K	F	T	S	V	F	V	T	H	D	Q	E	E	A	T	E	V	.	A	D	R	V	V	V	M	S	Q	G	N	I	E	Q	A	D	A	P	D	Q	V	W	R	E	P	A	T	R	F
Query Conservation																																																			.
Alig confidence																														.																					.
Template Conservation																														.
Template Sequence		P	T	Y	A	V	L	D	E	T	D	S	G	L	D	I	D	A	L	K	V	V	A	R	G	V	N	A	M	.	R	G	P	N	F	G	A	L	V	I	T	H	Y	Q	R	I	L	N	Y	I	Q	P	D	K	V	H	V	M	M	D	G	R	V	V	A	T	G	G	P	E	L	A	L	E	L	E	A	K	G	Y
Template Known Secondary structure			S							G	G	G	T	T																.		B	T	T	B							S	S	S	G	G	G	G	T	S			S							T	T							S
Template Predicted Secondary structure																														.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions