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Job DescriptionP16676
Confidence100.00%DateThu Jan 5 11:35:17 GMT 2012
Rank7Aligned Residues340
% Identity41%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.. .......20.........30.........40.........50.........60.........70.........80
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Query Sequence  SIEIANIKKSF. GRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF
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Template Sequence  TIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVF
Template Known Secondary structure 


TTSTT

TT

STTSSTSS

STT
TT

GGGSS
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
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Template Sequence  QNYALFQHMTVYDNVSFGLREK. . . . RVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLF
Template Known Secondary structure  TT



TTS
TTGGGT....T

TT
GGGTTS
GGGS
TT

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   94.....100.........110..... ....120.........130.........140.........150.........160.........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEV
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Template Sequence  DEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES
Template Known Secondary structure  STTTTS


S

STT
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPL
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Template Sequence  NVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAH. . AQVVRSAFKGSYSACWIRTKDGEVWEV
Template Known Secondary structure 
BTTSSS


TTS
TT

GGG

TTT
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   250.........260.........270.........280.........290.........300 .........310.........320.......
 
   321........330.........340.......
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Query Sequence  TVVMHGDDAPQRGERLFVGLQHARLYN
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Template Sequence  HVPSADRHRWSPGAWVHMNVTRWFIFP
Template Known Secondary structure  GGGTTT

TT



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   328.330.........340.........350....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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