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Job DescriptionP16676
Confidence100.00%DateThu Jan 5 11:35:17 GMT 2012
Rank45Aligned Residues198
% Identity31%Templatec1yqtA_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF
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Template Sequence  TLVTYPRLVKDYGSFR. LEVEPGEIKKGEVIGIVGPNGIGKTTFVKXLAGVEEPTEGKIEWDLT. . . . . . . . . . . VAYKP
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   338.340.........350... ......360.........370.........380.........390.........400 .....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  QHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
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Template Sequence  QYIKADYEGTVYELLSKI. . . . . . . . DASKLNSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLL
Template Known Secondary structure  SS




SSB........T
TTTTTT
GGGTTSBGGG

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   406...410.........420... ......430.........440.........450.........460.........470.......
 
   161........170.........180.........190.........200.........210.........
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Query Sequence  DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQAD
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Template Sequence  DEPSAYLDVEQRLAVSRAIRHLXEKNEKTALVVEHDVLXIDYVSDRLXVF. EGEPGKYG
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   478.480.........490.........500.........510.........520....... ..530.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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