 |
Job Description | P16676 | Confidence | 96.98% | Date | Thu Jan 5 11:35:17 GMT 2012 |
Rank | 174 | Aligned Residues | 83 |
% Identity | 13% | Template | c1h9sA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:molybdenum transport protein mode; |
PDBTitle: molybdate bound complex of dimop domain of mode from e.coli
|
Resolution | 1.82 Å |
|
 |
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | |
|
|
|
. | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | Q | G | P | V | D | L | F | L | R | P | W | E | V | D | I | S | R | R | . |
. |
. |
. |
T | S | L | D | S | P | L | P | V | Q | V | L | E | A | S | P | K | G | H | Y | T | Q | L | V | V | Q | P | L | G | W | Y | N | E | P | L | T | V | V | M | H | G | D | D | A | P | Q | R | G | E | R | L | F | V | G | L | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |
|   |
|   |
|
|
Template Sequence |   |
D | E | G | K | E | V | L | I | L | L | K | A | P | W | V | G | I | T | Q | D | E | A | V | A | Q | N | A | D | N | Q | L | P | G | I | I | S | H | I | E | R | G | A | E | Q | C | E | V | L | M | A | L | P | D | G | Q | T | L | C | A | T | V | P | V | N | E | A | T | S | L | Q | Q | G | Q | N | V | T | A | Y | F | N |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |
| G | G | G |
|  |  |  |
|
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  | G | G | G |
| T | T |
|
| T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |
  |   |
342 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
H | A | R | L | Y | N | G |
Query Conservation |   |
  |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
Template Sequence |   |
A | D | S | V | I | I | A |
Template Known Secondary structure |   |
G | G | G |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|