Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGB0
Confidence99.92%DateThu Jan 5 11:28:38 GMT 2012
Rank31Aligned Residues212
% Identity20%Templated1rlma_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GLLVMDMDSTAIQ. . . . . . . IECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANIL. . . . QQVREN
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Template Sequence  KVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGE
Template Known Secondary structure 






S
TTS


T

SS
GGG
TTTTTTSGGGTTT

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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   180.........190.........200. ........210.........220.........230.....
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Query Sequence  LPLMPGLTQLVLKLETLGWKVA. . . . . . . IASGGFTFFAEYLRDKLRLTAVVANELEIMDGKF. . . . . . . . . . . . . . . . .
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Template Sequence  LTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVID
Template Known Secondary structure 

T
TT
SS
TTS
TT
SSS
GGG

S


GGG
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   236...240.........250.........260.........270.........280......... 290.........
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Query Sequence  . . . . . . . . . . . . . . . TGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY. HAKPKVNEKA
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Template Sequence  KLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIA
Template Known Secondary structure  TTTSS
STT
TT
ST

GGG
SGGG
S
TT


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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   300.........310.........320..
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Query Sequence  EVTIRHADLMGVFCILSGSLNQK
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Template Sequence  RYATDDNNHEGALNVIQAVLDNT
Template Known Secondary structure  S


GGGTT
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   244.....250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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