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Job DescriptionP0AGB0
Confidence99.33%DateThu Jan 5 11:28:38 GMT 2012
Rank111Aligned Residues195
% Identity14%Templatec3qnmA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: haloalkane dehalogenase family member from bacteroides2 thetaiotaomicron of unknown function
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120......... 130.........140...... ...150.........160.....
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Query Sequence  TPGLLVMDMDSTAIQIECIDE. . . IAKLAGTGEMVAEVTER. . . . . . . . . . . . . . . . . . . . AMRGELDFTASLRSRVATL
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Template Sequence  KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQAV
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S

BTTTB
TTGGGTSSSTTSS
T
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   166...170......... 180.........190.........200.........210.........220.........230.......
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Query Sequence  KGADANILQQVREN. . . . . . . . LPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTG
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Template Sequence  GVEDEALAERFSEDFFAIIPTKSGLXPHAKEVLEYLAP. QYNLYILSNGFRELQSRKXRSAGVDRYFKKIILSE. . . . . .
Template Known Secondary structure  T


GGG


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   82.......90.........100.........110......... 120.........130.........140.........150....
 
   238.240.........250.........260.........270.... .....280......... 290.........300.........310...
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Query Sequence  NVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGA. NDLPMIKAAGLGIAY. . . HAKPKVNEKAEVTIRHADLMGVFC
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Template Sequence  . . . . DLGVLKPRPEIFHFALSATQSELRESLXIGDSWEADITGAHGVGXHQAFYNVTERTVFPFQPTYHI. . HSLKELXN
Template Known Secondary structure  ....GTT

TTSTT

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   155....160.........170.........180.........190.........200.........210.........220 ........
 
   314..
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Query Sequence  ILS
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Template Sequence  LLE
Template Known Secondary structure  T
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   229230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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