 |
Job Description | P0AGB0 | Confidence | 94.66% | Date | Thu Jan 5 11:28:38 GMT 2012 |
Rank | 155 | Aligned Residues | 69 |
% Identity | 20% | Template | c3qleA_ |
PDB info |
PDB header:chaperone | Chain: A: PDB Molecule:tim50p; |
PDBTitle: structural basis for the function of tim50 in the mitochondrial2 presequence translocase
|
Resolution | 1.83 Å |
|
 |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | P | H | L | R | T | P | G | L | L | V | M | D | M | D | S | T | A | I | Q | I | E | C | I | D | E | I | A | K | L | A | G | T | G | E | M | V | A | E | V | T | E | R | A | M | R | G | E | L | D | F | T | A | S | L | R | S | R | V | A | T | L | K | G | A | D | A | N | I | L | Q | Q | V | R | E | N | L | P | L | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
Template Sequence |   |
P | P | P | P | Q | R | P | L | T | L | V | I | T | L | E | D | F | L | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | S | E | W | S | Q | K | H | G | W | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | K | R |
Template Known Secondary structure |   |
|
|
|
|
|
| S |  |  |  |  |  |  |
| B | T | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | L | T | Q | L | V | L | K | L | E | T | L | G | W | K | V | A | I | A | S | G | G | F | T | F | F | A | E | Y | L | R | D | K | L | R |
Query Conservation |   |
|   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |
|   |   |   | . |
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
Template Sequence |   |
P | G | A | D | Y | F | L | G | Y | L | S | Q | Y | . |
Y | E | I | V | L | F | S | S | N | Y | M | M | Y | S | D | K | I | A | E | K | L | D |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  | T | T | T | . |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|