Job Description P0AGB0 Confidence 99.93% Date Thu Jan 5 11:28:38 GMT 2012 Rank 24 Aligned Residues 212 % Identity 18% Template c3pgvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution Resolution 2.39 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																																					.	.	.	.
Query SS confidence															.	.	.	.	.	.																																																					.	.	.	.
Query Sequence		T	P	G	L	L	V	M	D	M	D	S	T	A	.	.	.	.	.	.	I	Q	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E	M	V	A	E	V	T	E	R	A	M	R	G	E	L	D	F	T	A	S	L	R	S	R	V	A	T	L	K	G	A	D	A	N	I	L	.	.	.	.	Q	Q	V	R	E
Query Conservation															.	.	.	.	.	.																																																					.	.	.	.
Alig confidence															.	.	.	.	.	.																																																					.	.	.	.
Template Conservation
Template Sequence		X	Y	Q	V	V	A	S	D	L	D	G	T	L	L	S	P	D	H	F	L	T	P	Y	A	K	E	T	L	K	L	L	T	A	R	G	I	N	F	V	F	A	T	G	R	H	Y	I	D	V	G	Q	I	R	D	N	L	G	I	R	S	Y	X	I	T	S	N	G	A	R	V	H	D	S	D	G	Q	Q	I	F	A
Template Known Secondary structure				S											S		T	T	S																T	T								S	S		G	G	G	G							S		S							G	G	G	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	P	L	M	P	G	L	T	Q	L	V	L	K	L	E	T	L	G	W	K	V	A	I	A	S	G	G	F	T	F	F	A	E	Y	L	R	D	K	L	R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	N	L	D	R	D	I	A	A	D	L	F	E	I	V	R	N	D	P	K	I	V	T	N	V	Y	R	E	D	E	W	Y	X	N	R	H	R	P	V	F	N	Y	K	L	Y	E	P	G	E	L	D	P	Q	G	I	S	K	V	F	F	T	C	E	D	H	E	H	L	L	P	L	E	Q	A	X	N	A	R	W	G
Template Known Secondary structure													T	T	T	T	T	T		T	T								T	T					S	S												T	T		S			S	S									S																	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
										236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300			.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																							.												.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																							.												.	.
Query Sequence		.	.	.	.	.	.	.	.	T	G	N	V	I	G	D	I	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K	A	A	G	L	G	I	A	Y	.	H	A	K	P	K	V	N	E	K	A	E	.	.	V	T	I	R
Query Conservation		.	.	.	.	.	.	.	.																																																							.												.	.
Alig confidence		.	.	.	.	.	.	.	.																																																							.												.	.
Template Conservation
Template Sequence		D	R	V	N	V	S	F	S	T	L	T	C	L	E	V	X	A	G	G	V	S	K	G	H	A	L	E	A	V	A	K	X	L	G	Y	T	L	S	D	C	I	A	F	G	D	G	X	N	D	A	E	X	L	S	X	A	G	K	G	C	I	X	A	N	A	H	Q	R	L	K	D	L	H	P	E	L	E	V	I	G
Template Known Secondary structure		G	G						S	S	T	T							T	T		S												T	T			G	G	G							S	G	G	G							S	S						T	T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	D	L	M	G	V	F	C	I	L	S	G	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	A	D	D	A	V	P	R	Y	L	R	K	L	Y	L
Template Known Secondary structure			G	G	G	T											T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions