Job Description P0AGB0 Confidence 99.79% Date Thu Jan 5 11:28:38 GMT 2012 Rank 54 Aligned Residues 182 % Identity 21% Template c3mpoD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis Resolution 2.90 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																				.	.														.	.	.	.	.
Query SS confidence																																																				.	.														.	.	.	.	.
Query Sequence		G	L	L	V	M	D	M	D	S	T	A	I	Q	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E	M	V	A	E	V	T	E	R	A	M	R	G	E	L	D	F	T	A	S	L	R	S	.	.	R	V	A	T	L	K	G	A	D	A	N	I	L	.	.	.	.	.	Q	Q	V	R	E	N	L	P	L	M
Query Conservation																																																				.	.														.	.	.	.	.
Alig confidence															.	.																																				.	.														.	.	.	.	.
Template Conservation															.	.
Template Sequence		K	L	I	A	I	D	I	D	G	T	L	Q	A	.	.	T	I	D	A	V	Q	A	A	K	A	Q	G	I	K	V	V	L	C	T	G	R	P	L	T	G	V	Q	P	Y	L	D	A	X	D	I	D	G	D	D	Q	Y	A	I	T	F	N	G	S	V	A	Q	T	I	S	G	K	V	L	T	N	H	S	L	T	Y
Template Known Secondary structure		S						T	T	T	T			T	.	.	T										T	T								S	S		G	G	G	T							T	T			S	S	S						G	G	G	T					T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	L	T	Q	L	V	L	K	L	E	T	L	G	W	K	V	A	I	A	S	G	G	F	.	.	.	.	.	.	.	.	T	F	F	A	E	Y	L	R	D	K	L	R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	Y	I	D	L	E	A	W	A	R	K	V	R	A	H	F	Q	I	E	T	P	D	Y	I	Y	T	A	N	K	D	I	S	A	Y	T	I	A	E	S	Y	L	V	R	X	L	I	Q	Y	R	E	V	S	E	T	P	R	D	L	T	I	S	K	A	X	F	V	D	Y	P	Q	V	I	E	Q	V	K	A	N	X
Template Known Secondary structure															T								S	S							S	S													T								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
															236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	N	V	I	G	D	I	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K	A	A	G	L	G	I	A	Y	.	H	A	K	P	K	V	N	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																.
Template Conservation																																																			.	.	.
Template Sequence		P	Q	D	F	K	D	R	F	S	V	V	Q	S	A	P	Y	F	I	E	V	X	N	R	R	A	S	K	G	G	T	L	S	E	L	V	D	Q	L	G	L	T	A	D	D	V	X	T	L	G	.	.	.	N	D	L	T	X	I	K	Y	A	G	L	G	V	A	X	G	N	A	I	D	E	V	K	E
Template Known Secondary structure																T	T							T	T														T	T			G	G	G						.	.	.	T	T							S	T						T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions