Job Description P0AGB0 Confidence 99.91% Date Thu Jan 5 11:28:38 GMT 2012 Rank 39 Aligned Residues 211 % Identity 17% Template c3l7yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c; PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159 Resolution 2.00 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		P	G	L	L	V	M	D	M	D	S	T	A	I	Q	.	.	.	.	.	.	.	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E	M	V	A	E	V	T	E	R	A	M	R	G	E	L	D	F	T	A	S	L	R	S	R	V	A	T	L	K	G	A	D	A	N	I	L	Q	Q	V	R	E	N	L	P	L
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	V	I	A	T	D	M	D	G	T	F	L	N	S	K	G	S	Y	D	H	N	R	F	Q	R	I	L	K	Q	L	Q	E	R	D	I	R	F	V	V	A	S	S	N	P	Y	R	Q	L	R	E	H	F	P	D	C	H	E	Q	L	T	F	V	G	E	N	G	A	N	I	I	S	K	N	Q	S	L	I	E	V
Template Known Secondary structure			S											S		T	T	S																	T	T								S	S							T	T		T	T	T	G	G	G	S					G	G	G	T					T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	G	L	T	Q	L	V	L	K	L	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	W	K	V	A	I	A	S	G	G	F	T	F	F	A	E	Y	L	R	D	K	L	R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	Q	R	E	D	I	A	S	I	I	Y	F	I	E	E	K	Y	P	Q	A	V	I	A	L	S	G	E	K	K	G	Y	L	K	K	G	V	S	E	N	I	V	K	M	L	S	P	F	F	P	V	L	E	L	V	N	S	F	S	P	L	P	E	R	F	F	K	L	T	L	Q	V	K	E	E	E	S	A	Q	I
Template Known Secondary structure																				T	T	S							S	S						T	T	S									T	T	S		S	S					S			S	S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																				236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	N	V	I	G	D	I	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K	A	A	G	L	G	I	A	Y	.	H	A	K	P	K	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation
Template Sequence		M	K	A	I	A	D	Y	K	T	S	Q	R	L	V	G	T	A	S	G	F	G	Y	I	D	I	I	T	K	G	L	H	K	G	W	A	L	Q	Q	L	L	K	R	W	N	F	T	S	D	H	L	M	A	F	G	D	G	G	N	D	I	E	M	L	K	L	A	K	Y	S	Y	A	M	A	N	A	P	K	N	V	K
Template Known Secondary structure							T	S	T	T	T	T	T							S	T	T							T	T		S												T	T			G	G	G							S	G	G	G								T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	E	V	T	I	R	H	A	D	L	M	G	V	F	C	I	L	S	G	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	N	Y	Q	A	K	S	N	D	E	S	G	V	L	D	V	I	D	N	Y	L	A
Template Known Secondary structure					S						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions