Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGB0
Confidence99.97%DateThu Jan 5 11:28:38 GMT 2012
Rank9Aligned Residues283
% Identity15%Templatec3ixzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:potassium-transporting atpase alpha; PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
Resolution6.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90... ......100.........110......
Predicted Secondary structure 













.















Query SS confidence 























































.






















Query Sequence  SGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHE. AQLDVAPLGKIPHLRTPGLLVMD
Query Conservation        
  

   
                            
            .                  

  
Alig confidence 























































.






















Template Conservation        
   
 

                         
 
  
 



               




 

  
    
Template Sequence  PKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSIL
Template Known Secondary structure  TTS
BSS
TTTS
S

S

S

SS



SSSS
S
T
Template Predicted Secondary structure 





































Template SS confidence 















































































   452.......460.........470.........480.........490.........500.........510.........520.........530.
 
   117..120... ......130.........140......... 150.........160.........170.........180.........
Predicted Secondary structure 






......









.














Query SS confidence 






. . . . . .

























.







































Query Sequence  MDSTAIQ. . . . . . IECIDEIAKLAGTGEMVAEVTERAMR. GELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQL
Query Conservation   




 ...... 
 

 
      
  
   
 
   .
       
                 
     
 
   
 
Alig confidence 






......

























.







































Template Conservation                         
  
 


  
 
 
                   
  
 




   
 

      
Template Sequence  IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDA
Template Known Secondary structure  SSS





TTT


GGG

TT



SSS

S

SS

B
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   532.......540.........550.........560.........570.........580.........590.........600.........610.
 
   190.........200.........210.........220.........230.........240
Predicted Secondary structure 



















.............................
Query SS confidence 


















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVI. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
  

  

 
 



     
   
  


    
               .............................
Alig confidence 


















































.............................
Template Conservation 
  
  


 
 




   

  

   

                             




  
  
         
Template Sequence  VLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEAL
Template Known Secondary structure  TT
B
SS
TTS

S
BTTTT





SSSST


SB

TT

Template Predicted Secondary structure 






































Template SS confidence 















































































   612.......620.........630.........640.........650.........660.........670.........680.........690.
 
   241........250.........260.........270.........280......... 290.........300.........310.....
Predicted Secondary structure  ...


















..







Query SS confidence  . . .
















































. .

























Query Sequence  . . . GDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY. . HAKPKVNEKAEVTIRHADLMGVFCIL
Query Conservation  ...        
   
  
   
      
 




 


 

  





 ..

 
 
   

 

   

      
Alig confidence  ...
















































..

























Template Conservation        



 

  
  

  

  
  
 




 

  

  







  

  
  





    
  
   
Template Sequence  RTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGV
Template Known Secondary structure  S



S

TTTTT


SGGGTTTTTSSS
TTSS
TT
S
SS

TT
Template Predicted Secondary structure 























Template SS confidence 















































































   692.......700.........710.........720.........730.........740.........750.........760.........770.
 
   316...320
Predicted Secondary structure 
Query SS confidence 




Query Sequence  SGSLN
Query Conservation       
Alig confidence 




Template Conservation    

 
Template Sequence  EQGRL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   772....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions