Job Description P0AGB0 Confidence 99.95% Date Thu Jan 5 11:28:38 GMT 2012 Rank 11 Aligned Residues 226 % Identity 16% Template c3b8cB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump Resolution 3.60 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	A	M	V	I	V	A	A	W	C	V	E	D	Y	Q	V	I	R	L	A	G	S	L	T	A	R	A	T	R	L	A	H	E	A	Q	L	D	V	A	P	L	G	K	I	P	H	L	R	T	P	G	L	L	V	M	D	M	D	S	T	A	I	Q	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	D	K	R	T	A	L	T	Y	I	D	G	S	G	N	W	H	R	V	S	K	G	A	P	E	Q	I	L	E	L	A	K	A	S	N	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	K	V	L	S	I	I	D	K	Y	A	E	R	G	L
Template Known Secondary structure		T	T	T						B	B		S	S	S	S		B		B					S	G	G	G	T	S	S	S	S				S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T									T	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.																											440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	A	E	V	T	E	R	A	M	R	G	E	L	D	F	T	A	S	L	R	S	R	V	A	T	L	K	G	A	D	A	N	I	L	Q	Q	V	R	E	N	L	P	L	M	P	G	L	T	Q	L	V	L	K	L	E	T	L	G	W	K	V	A	I	A	S	G	G	F	T	F	F	A	E	Y	L	R	D	K	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	L	A	V	A	R	Q	V	V	P	E	K	T	.	.	.	.	.	.	.	.	.	.	K	E	S	P	G	A	P	W	E	F	V	G	L	L	P	L	F	D	P	P	R	H	D	S	A	E	T	I	R	R	A	L	N	L	G	V	N	V	K	M	I	T	G	D	Q	L	A	I	G	K	E	T	G	R	R	L
Template Known Secondary structure									B				S	S	S	.	.	.	.	.	.	.	.	.	.	S	S																																T	T								S	S						T					T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.											470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	T	G	N	V	I	G	D	I	.	.	.	.	.	.	.	.	.	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K	A	A	G	L	G	I	A	Y
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	G	T	N	M	Y	P	S	S	A	L	L	G	T	H	K	D	A	N	L	A	S	I	P	V	E	E	L	I	E	K	A	D	G	F	A	G	V	F	P	E	H	K	Y	E	I	V	K	K	L	Q	E	R	K	H	I	V	G	M	T	G	D	G	V	N	D	A	P	A	L	K	K	A	D	I	G	I	A	V
Template Known Secondary structure		T		T	T			S	S	S	S	S			B	G	G	G	G	T	T	S			S								T	S																					T	T					B				S	S	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	A	K	P	K	V	N	E	K	A	E	V	T	I	R	H	A	D	L	M	G	V	F	C	I	L	S	G	S	L	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	D	A	T	D	A	A	R	G	A	S	D	I	V	L	T	E	P	G	L	S	V	I	I	S	A	V	L	T	S	R	A
Template Known Secondary structure		S	S	S					G	G	G		S	S		B	S	S		S					T					T
Template Predicted Secondary structure
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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