Job Description P0AGB0 Confidence 99.97% Date Thu Jan 5 11:28:38 GMT 2012 Rank 6 Aligned Residues 282 % Identity 13% Template c2zxeA_ PDB info PDB header:hydrolase/transport protein Chain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state Resolution 2.40 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		G	W	L	L	Y	G	R	G	L	D	K	Q	R	L	T	Q	Y	Q	S	K	L	G	A	A	M	V	I	V	A	A	W	C	V	E	D	Y	Q	V	I	R	L	A	G	S	L	T	A	R	A	T	R	L	A	H	E	.	A	Q	L	D	V	A	P	L	G	K	I	P	H	L	R	T	P	G	L	L	V	M	D	M
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		K	R	S	V	A	G	D	A	S	E	S	A	L	L	K	C	I	E	L	C	C	G	S	V	Q	G	M	R	D	R	N	P	K	I	V	E	I	P	F	N	S	T	N	K	Y	Q	L	S	I	H	E	N	E	K	S	S	E	S	R	Y	L	L	V	M	K	G	A	P	E	R	I	L	D	R	C	S	T	I	L	L
Template Known Secondary structure		G	S				S																S									S										T	T	T										S		T	T	T																T	T						B
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		118	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure								.	.	.	.	.	.																											.
Query SS confidence								.	.	.	.	.	.																											.
Query Sequence		D	S	T	A	I	Q	.	.	.	.	.	.	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E	M	V	A	E	V	T	E	R	A	M	R	.	G	E	L	D	F	T	A	S	L	R	S	R	V	A	T	L	K	G	A	D	A	N	I	L	Q	Q	V	R	E	N	L	P	L	M	P	G	L	T	Q	L	V
Query Conservation								.	.	.	.	.	.																											.
Alig confidence								.	.	.	.	.	.																											.
Template Conservation
Template Sequence		N	G	A	E	E	P	L	K	E	D	M	K	E	A	F	Q	N	A	Y	L	E	L	G	G	L	G	E	R	V	L	G	F	C	H	F	A	L	P	E	D	K	Y	N	E	G	Y	P	F	D	A	D	E	P	N	F	P	T	T	D	L	C	F	V	G	L	M	A	M	I	D	P	P	R	A	A	V	P	D	A	V
Template Known Secondary structure		T	T	B			B																			T	T													S	T	T	S		T	T					T	T	T	T		S			S	S													B		T	T
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	L	E	T	L	G	W	K	V	A	I	A	S	G	G	F	T	F	F	A	E	Y	L	R	D	K	L	R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	T	G	N	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	C	R	S	A	G	I	K	V	I	M	V	T	G	D	H	P	I	T	A	K	A	I	A	K	G	V	G	I	I	S	E	G	N	E	T	I	E	D	I	A	A	R	L	N	I	P	I	G	Q	V	N	P	R	D	A	K	A	C	V	V	H	G	S	D	L	K	D	L	S	T	E	V	L	D	D	I	L	H
Template Known Secondary structure							T	T								S	S													T	S	S		T	T											T	T			G	G	G	S		G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
				241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																		.	.
Query SS confidence		.	.																																																		.	.
Query Sequence		.	.	G	D	I	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K	A	A	G	L	G	I	A	Y	.	.	H	A	K	P	K	V	N	E	K	A	E	V	T	I	R	H	A	D	L	M	G	V	F	C	I	L	S
Query Conservation		.	.																																																		.	.
Alig confidence		.	.																																																		.	.
Template Conservation
Template Sequence		Y	H	T	E	I	V	F	A	R	T	S	P	Q	Q	K	L	I	I	V	E	G	C	Q	R	Q	G	A	I	V	A	V	T	G	D	G	V	N	D	S	P	A	L	K	K	A	D	I	G	V	A	M	G	I	S	G	S	D	V	S	K	Q	A	A	D	M	I	L	L	D	D	N	F	A	S	I	V	T	G	V	E
Template Known Secondary structure				S						S																T	T									S	G	G	G							S	S						S	S	S										S				T	T			T
Template Predicted Secondary structure
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		317	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		764	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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