Job Description P0AGB0 Confidence 99.89% Date Thu Jan 5 11:28:38 GMT 2012 Rank 49 Aligned Residues 143 % Identity 27% Template c2b8eB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:cation-transporting atpase; PDBTitle: copa atp binding domain Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	I	E	C	I	D	E	I	A	K	L	A	G	T	G	E	M	V	A	E	V	T	E	R	A	M	R	G	E	L	D	F	T	A	S	L	R	S	R	V	A	T	L	K	G	A	D	A	N	I	L	Q	Q	V	R	E	N	L	P	L	M	P	G	L	T	Q	L	V	L	K	L	E	T	L	G	W	K	V	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	R	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V	Q	E	L	K	R	X	G	I	K	V	G
Template Known Secondary structure																T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T												B		T	T											T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.																								.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	G	G	F	T	F	F	A	E	Y	L	R	D	K	L	R	L	T	A	V	V	A	N	E	L	E	I	M	D	G	K	F	T	G	N	V	I	G	D	I	V	D	A	Q	Y	K	A	K	T	L	T	R	L	A	Q	E	Y	E	I	P	L	A	Q	T	V	A	I	G	D	G	A	N	D	L	P	M	I	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		X	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	L	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	P	H	Q	K	S	E	E	V	K	K	L	Q	.	A	K	E	V	V	A	F	V	G	D	G	I	N	D	A	P	A	L	A
Template Known Secondary structure					S	S												T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T										T	.	T	T	S								S	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.																						.	.	.	.	.	.	600	.	.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	L	G	I	A	Y	H	A	K	P	K	V	N	E	K	A	E	V	T	I	R	H	A	D	L	M	G	V	F	C	I	L	S	G	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	D	L	G	I	A	V	.	.	.	.	.	.	.	.	.	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q	L	S
Template Known Secondary structure			S	S						.	.	.	.	.	.	.	.	.						S	S			T								T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		628	.	630	.	.	.	.	.										.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions