Job Description P0A8Q6 Confidence 6.57% Date Thu Jan 5 11:08:31 GMT 2012 Rank 38 Aligned Residues 71 % Identity 11% Template c2xznM_ PDB info PDB header:ribosome Chain: M: PDB Molecule:rps18e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	K	V	I	L	V	N	D	D	Y	T	P	M	E	F	V	I	D	V	L	Q	K	F	F	S	Y	D	V	E	R	A	T	Q	L	M	L	A	V	H	Y	Q	G	K	A	I	C	G	V	F	T	A	E	V	A	E	T	K	V	A	M	V	N	K	Y	A	R	E	N	E	H	P
Query Conservation
Alig confidence																																																																					.
Template Conservation																																																																					.
Template Sequence		K	Y	I	H	R	I	L	N	T	N	I	D	G	K	R	I	T	P	I	A	L	T	G	I	R	G	I	G	R	R	F	A	Y	I	I	C	K	V	L	K	I	D	P	N	A	R	A	G	L	L	T	E	D	Q	C	N	K	I	T	D	L	I	A	D	P	E	A	.	H	G	I	P
Template Known Secondary structure			S					T	T	T					S	S							T	T	S	T	T													T	T			S	S	S		S	S		S														S				.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions