Job Description P38105 Confidence 100.00% Date Wed Jan 25 15:20:53 GMT 2012 Rank 31 Aligned Residues 333 % Identity 26% Template c3ip1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima Resolution 2.09 Å

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		1	.	.	.	.	.	.				.	.	10	.																										.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																										.	.	.	.	.
Query SS confidence									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																										.	.	.	.	.
Query Sequence		M	K	S	I	L	I	E	.	.	.	K	P	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	I	V	E	R	E	I	P	T	.	P	S	A	G	E	V	R	V	K	V	K	L	A	G	I	C	G	S	D	S	H	I	Y	R	G	.	.	.	.	.
Query Conservation									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																										.	.	.	.	.
Alig confidence									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																										.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	V	R	L	H	A	K	W	D	P	R	P	E	F	K	L	G	P	K	D	I	E	G	K	L	T	W	L	G	S	K	V	W	R	Y	P	E	V	R	V	E	E	V	P	E	P	R	I	E	K	P	T	E	I	I	I	K	V	K	A	C	G	I	C	G	S	D	V	H	X	A	Q	T	D	E	E	G	Y
Template Known Secondary structure															T	T					T	T		B	T	T	T	B	B	S		G	G	G	T																		S	T	T																					B		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																												.	.	.	.	.	.
Query SS confidence		.	.																												.	.	.	.	.	.
Query Sequence		.	.	H	N	P	F	A	K	Y	P	R	V	I	G	H	E	F	F	G	V	I	D	A	V	G	E	G	V	E	.	.	.	.	.	.	S	A	R	V	G	E	R	V	A	V	D	P	V	V	S	C	G	H	C	Y	P	C	S	I	G	K	P	N	V	C	T	T	L	A	V	L	G	V	H	A	D	G	G	F	S
Query Conservation		.	.																												.	.	.	.	.	.
Alig confidence		.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	Y	P	G	L	T	G	F	P	V	T	L	G	H	E	F	S	G	V	V	V	E	A	G	P	E	A	I	N	R	R	T	N	K	R	F	E	I	G	E	P	V	C	A	E	E	X	L	W	C	G	H	C	R	P	C	A	E	G	F	P	N	H	C	E	N	L	N	E	L	G	F	N	V	D	G	A	F	A
Template Known Secondary structure		B	S			S		B		S	S																T	T				T	T	T	T					T	T							S					S		S					T	T		G	G	G		T	T				B	T	T	T	B			S	S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		E	Y	A	V	V	P	A	K	N	A	W	K	I	P	E	A	V	A	D	Q	Y	A	V	M	I	E	P	F	T	I	A	A	N	V	T	.	.	.	.	.	.	.	.	G	H	G	Q	P	T	E	N	D	T	V	L	V	Y	G	A	G	P	I	G	L	T	I	V	Q	V	L	K	G	V	Y	N	V	K	N	V	I
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	V	K	V	D	A	K	Y	A	W	S	L	R	E	L	E	G	V	Y	E	G	D	R	L	F	L	A	G	S	L	V	E	P	T	S	V	A	Y	N	A	V	I	V	R	G	G	G	I	R	P	G	D	N	V	V	I	L	G	G	G	P	I	G	L	A	A	V	A	I	L	K	H	A	G	A	S	K	V	I
Template Known Secondary structure		S						G	G	G					G	G	G	T	T	T	S		T	T								T												T	T	T	T					T	T									S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																				.	.																														.	.	.	.	.
Query SS confidence																																				.	.																														.	.	.	.	.
Query Sequence		V	A	D	R	I	D	E	R	L	E	K	A	K	E	S	G	A	D	W	A	I	N	N	S	Q	T	P	L	G	E	I	F	T	E	.	.	K	G	I	K	P	T	L	I	I	D	A	A	C	H	P	S	I	L	K	E	A	V	T	L	A	S	P	A	A	.	.	.	.	.	R	I	V	L	M	G	F	S	S	E
Query Conservation																																				.	.																														.	.	.	.	.
Alig confidence																																				.	.																														.	.	.	.	.
Template Conservation
Template Sequence		L	S	E	P	S	E	V	R	R	N	L	A	K	E	L	G	A	D	H	V	I	D	P	T	K	E	N	F	V	E	A	V	L	D	Y	T	N	G	L	G	A	K	L	F	L	E	A	T	G	V	P	Q	L	V	W	P	Q	I	E	E	V	I	W	R	A	R	G	I	N	A	T	V	A	I	V	A	R	A	D	A
Template Known Secondary structure					S												T		S					T	T	T	S										T	T	T				S						S	S																	S										S				S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		P	S	E	V	I	Q	Q	G	I	T	G	K	E	L	S	I	F	S	S	R	L	N	.	.	A	N	K	F	P	I	V	I	D	W	L	S	K	G	L	I	K	P	E	K	L	I	T	H	T	F	D	F	Q	H	V	A	D	A	I	S	L	F	E	Q	D	Q	K	H	C	C	K	V	L	L
Query Conservation																								.	.
Alig confidence																								.	.															.																														.
Template Conservation																																								.																														.
Template Sequence		K	I	P	L	T	G	E	V	F	Q	V	R	R	A	Q	I	V	G	S	Q	G	H	S	G	H	G	T	F	P	R	V	I	S	L	X	A	S	G	.	X	D	X	T	K	I	I	S	K	T	V	S	X	E	E	I	P	E	Y	I	K	R	L	Q	T	D	K	S	L	.	V	K	V	T	X
Template Known Secondary structure													T	T											S	T	T											T	T	.			G	G	G	G							G	G	G								T	T	T		T	T		.	S
Template Predicted Secondary structure																																								.																														.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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