Job Description P38105 Confidence 100.00% Date Wed Jan 25 15:20:53 GMT 2012 Rank 48 Aligned Residues 291 % Identity 16% Template c3gohA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	K	S	I	L	I	E	K	P	N	.	Q	L	A	I	V	E	R	E	I	P	T	P	S	A	G	E	V	R	V	K	V	K	L	A	G	I	C	G	S	D	S	H	I	Y	R	G	H	N	P	F	A	K	Y	P	R	V	I	G	H	E	F	F	G	V	I	D	A	V	G	E	G	V	E	S	A	R	V	G	E
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		H	Q	V	W	A	Y	Q	T	K	T	H	S	V	T	L	N	S	V	D	I	P	A	L	A	A	D	D	I	L	V	Q	N	Q	A	I	G	I	N	P	V	D	W	K	F	I	K	A	N	P	I	N	W	S	N	G	H	V	P	G	V	D	G	A	G	V	I	V	K	V	G	A	K	V	D	S	K	X	L	G	R
Template Known Secondary structure									T	T	T	T														T	T																							T	T				T	T					S											T	T	S		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	V	D	P	V	V	S	C	G	H	C	Y	P	C	S	I	G	K	P	N	V	C	T	T	L	A	V	L	G	V	H	A	D	G	G	F	S	E	Y	A	V	V	P	A	K	N	A	W	K	I	P	E	A	V	A	D	Q	Y	A	V	M	I	E	P	F	T	I	A	A	N	V	T	G	H	G	Q	P	T
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	A	Y	H	T	S	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	G	S	F	A	E	F	T	V	L	N	T	D	R	V	X	T	L	P	D	N	L	S	F	E	R	A	A	A	L	P	C	P	L	L	T	A	W	Q	A	F	E	K	I	P	L
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S	B	S						T	T	S						T	T	S							T	S												T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.																									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	D	T	V	L	V	Y	G	A	G	P	I	G	L	T	I	V	Q	V	L	K	G	V	Y	N	V	K	N	V	I	V	A	D	R	I	D	E	R	L	E	K	A	K	E	S	G	A	D	W	A	I	N	N	S	Q	T	P	L	G	E	I	F	T	E	K	G	I	K	P	T	L	I	I	D	A	A	C	H	P
Query Conservation
Alig confidence																																			.	.																								.	.	.	.	.	.	.	.													.	.
Template Conservation																																			.	.																								.	.	.	.	.	.	.	.													.	.
Template Sequence		T	K	Q	R	E	V	L	I	V	G	F	G	A	V	N	N	L	L	T	Q	X	L	N	N	A	G	Y	V	V	D	L	V	S	.	.	A	S	L	S	Q	A	L	A	A	K	R	G	V	R	H	L	Y	R	E	P	S	Q	V	.	.	.	.	.	.	.	.	T	Q	K	Y	F	A	I	F	D	A	A	L	.	.
Template Known Secondary structure			S										S														T								.	.	S	S										T						S	S	G	G	G		.	.	.	.	.	.	.	.		S									T	T	.	.
Template Predicted Secondary structure																																			.	.																								.	.	.	.	.	.	.	.													.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		S	I	L	K	E	A	V	T	L	A	S	P	A	A	R	I	V	L	M	G	F	S	S	E	P	S	E	V	I	Q	Q	G	I	T	G	K	E	L	S	I	F	S	S	.	R	L	N	A	N	K	F	P	I	V	I	D	W	L	S	K	G	L	I	K	P	E	K	L	I	T	H	T	F	D	F	Q	H	V	A	D
Query Conservation																																													.
Alig confidence		.	.	.	.	.	.																																						.																							.	.
Template Conservation		.	.	.	.	.	.																																																													.	.
Template Sequence		.	.	.	.	.	.	V	P	S	L	K	A	N	G	H	I	I	C	I	Q	D	R	R	T	I	S	Y	H	E	I	A	L	G	A	L	H	D	F	G	D	R	Q	D	W	Q	I	L	X	Q	Q	G	E	A	L	L	T	L	I	A	Q	G	K	X	E	I	A	.	.	A	P	D	I	F	R	F	E	Q	X	I	E
Template Known Secondary structure		.	.	.	.	.	.	G	G	G																S							G	G	G																										T	T	S	S				.	.							G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.																																																													.	.
Template SS confidence
								215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	L	F	E	Q	D	Q	K	H	C	C	K	V	L	L	T
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		A	L	D	H	S	E	Q	T	K	L	K	.	T	V	L	T	L	N
Template Known Secondary structure													.					S
Template Predicted Secondary structure													.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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