Job Description P38105 Confidence 100.00% Date Wed Jan 25 15:20:53 GMT 2012 Rank 51 Aligned Residues 302 % Identity 15% Template c1xa0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		M	K	S	I	L	I	E	K	P	N	.	.	.	Q	L	A	I	V	E	R	E	I	P	T	P	S	A	G	E	V	R	V	K	V	K	L	A	G	I	C	G	S	D	S	H	I	Y	R	G	H	N	P	F	A	K	Y	P	R	V	I	G	H	E	F	F	G	V	I	D	A	V	G	E	G	V	E	S	A	R	V
Query Conservation												.	.	.
Alig confidence												.	.	.																																																										.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		F	Q	A	F	V	V	N	K	T	E	T	E	F	T	A	G	V	Q	T	I	S	X	D	D	L	P	E	G	D	V	L	V	R	V	H	Y	S	S	V	N	Y	K	D	G	L	A	S	I	P	D	G	K	I	V	K	T	P	F	V	P	G	I	D	L	A	G	V	V	V	S	.	.	.	.	.	S	Q	H	P	E
Template Known Secondary structure											S	S											G	G	G	S				S																	T	T	S	S	S	S	T	T					B				S									.	.	.	.	.		S
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		G	E	R	V	A	V	D	P	V	V	S	C	G	H	C	Y	P	C	S	I	G	K	P	N	V	C	T	T	L	A	V	L	G	V	H	A	D	G	G	F	S	E	Y	A	V	V	P	A	K	N	A	W	K	I	P	E	A	V	A	D	Q	Y	A	V	M	I	E	P	F	T	I	A	A	N	V	T	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	E	V	I	A	T	G	Y	E	I	G	V	T	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Y	S	E	Y	A	R	L	H	G	E	W	L	V	P	L	P	K	G	L	T	L	K	E	A	X	A	I	G	T	A	G	F	T	A	A	L	S	I	H	R	L
Template Known Secondary structure									S	T	T	T	T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	B	S						T	T	T						T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	H	G	Q	P	T	E	N	D	T	V	L	V	Y	G	A	G	P	I	G	L	T	I	V	Q	V	L	K	G	V	Y	N	V	K	N	V	I	V	A	D	R	I	D	E	R	L	E	K	A	K	E	S	G	A	D	W	A	I	N	N	S	Q	T	P	L	G	E	I	F	T	E	K	G	I	K	P	T	L	I
Query Conservation		.
Alig confidence		.																																			.																															.	.	.	.	.	.	.
Template Conservation																																					.																															.	.	.	.	.	.	.
Template Sequence		E	E	H	G	L	T	P	E	R	G	P	V	L	V	T	G	A	T	G	G	V	G	S	L	A	V	S	X	L	A	K	R	G	Y	T	.	V	E	A	S	T	G	K	A	A	E	H	D	Y	L	R	V	L	G	A	K	E	V	L	A	E	R	I	R	P	L	.	.	.	.	.	.	.	D	K	Q	R	W	A	A
Template Known Secondary structure			T	T	T			G	G	G								T	T	S													T	T			.						S		G	G	G								T		S							S	S	S		.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																					.																															.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.
Predicted Secondary structure																																.																								.	.																				.
Query SS confidence																																.																								.	.																				.
Query Sequence		I	D	A	A	C	H	P	S	I	L	K	E	A	V	T	L	A	S	P	A	A	R	I	V	L	M	G	F	S	S	.	E	P	S	E	V	I	Q	Q	G	I	T	G	K	E	L	S	I	F	S	S	R	L	N	.	.	A	N	K	F	P	I	V	I	D	W	L	S	K	G	L	I	K	P	E	.	K	L	I	T
Query Conservation																																.																								.	.																				.
Alig confidence																																.																								.	.																				.
Template Conservation
Template Sequence		A	V	D	P	V	G	G	R	T	L	A	T	V	L	S	R	X	R	Y	G	G	A	V	A	V	S	G	L	T	G	G	A	E	V	P	T	T	V	H	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C	P	X	D	L	R	L	R	I	W	E	R	L	A	G	D	L	K	P	D	L	E	R	I	A
Template Known Secondary structure						S	T	T	T	T					G	G	G											S			S	S	S						S							T								S	T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	F	D	F	Q	H	V	A	D	A	I	S	L	F	E	Q	D	Q	K	H	C	C	K	V	L	L	T	F
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		Q	E	I	S	L	A	E	L	P	Q	A	L	K	R	I	L	R	G	E	L	R	.	G	R	T	V	V	R	L
Template Known Secondary structure						G	G	G										T	T				.	S
Template Predicted Secondary structure																							.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions