Phyre 2 alignment of P38105 with c1piwA

Job Description P38105
Confidence 100.00% Date Wed Jan 25 15:20:53 GMT 2012

Rank 26 Aligned Residues 335

% Identity 19% Template c1piwA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical zinc-type alcohol dehydrogenase- PDBTitle: apo and holo structures of an nadp(h)-dependent cinnamyl2 alcohol dehydrogenase from saccharomyces cerevisiae

Resolution 3.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.
Predicted Secondary structure											.	.	.																																																															.
Query SS confidence											.	.	.																																																															.
Query Sequence	M	K	S	I	L	I	E	K	P	N	.	.	.	Q	L	A	I	V	E	R	E	I	P	T	P	S	A	G	E	V	R	V	K	V	K	L	A	G	I	C	G	S	D	S	H	I	Y	R	G	H	N	P	F	A	K	Y	P	R	V	I	G	H	E	F	F	G	V	I	D	A	V	G	E	G	V	.	E	S	A	R
Query Conservation											.	.	.																																																															.
Alig confidence											.	.	.																																																															.
Template Conservation
Template Sequence	F	E	G	I	A	I	Q	S	H	E	D	W	K	N	P	K	K	T	K	Y	D	P	K	P	F	Y	D	H	D	I	D	I	K	I	E	A	C	G	V	C	G	S	D	I	H	C	A	A	G	H	W	G	N	M	K	M	P	L	V	V	G	H	E	I	V	G	K	V	V	K	L	G	P	K	S	N	S	G	L	K
Template Known Secondary structure									S	S	S	T	T	S													T	T																				T	T	T	T	S				S	S																T	T			S	S
Template Predicted Secondary structure
Template SS confidence
	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

	77	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																								.	.	.	.	.	.	.
Query SS confidence												.																								.	.	.	.	.	.	.
Query Sequence	V	G	E	R	V	A	V	D	P	V	V	.	S	C	G	H	C	Y	P	C	S	I	G	K	P	N	V	C	T	T	L	A	V	L	G	.	.	.	.	.	.	.	V	H	A	D	G	G	F	S	E	Y	A	V	V	P	A	K	N	A	W	K	I	P	E	A	V	A	D	Q	Y	A	V	M	I	E	P	F	T	I
Query Conservation												.																								.	.	.	.	.	.	.
Alig confidence												.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	G	Q	R	V	G	V	G	A	Q	V	F	S	C	L	E	C	D	R	C	K	N	D	N	E	P	Y	C	T	K	F	V	T	T	Y	S	Q	P	Y	E	D	G	Y	V	S	Q	G	G	Y	A	N	Y	V	R	V	H	E	H	F	V	V	P	I	P	E	N	I	P	S	H	L	A	A	P	L	L	C	G	G	L
Template Known Secondary structure	T	T							S						S		S					T	T		G	G	G		T	T				S	S	S		B		T	T	S		B				S	S	B	S						G	G	G						T	T	S						G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
	87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	A	N	V	T	G	H	G	Q	P	T	E	N	D	T	V	L	V	Y	G	A	G	P	I	G	L	T	I	V	Q	V	L	K	G	V	Y	N	V	K	N	V	I	V	A	D	R	I	D	E	R	L	E	K	A	K	E	S	G	A	D	W	A	I	N	N	S	Q	T	P	L	G	E	I	F	T	E	K	G	I	K
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence	T	V	Y	S	P	L	V	R	N	G	C	G	P	G	K	K	V	G	I	V	G	L	G	G	I	G	S	M	G	T	L	I	S	K	A	M	G	.	A	E	T	Y	V	I	S	R	S	S	R	K	R	E	D	A	M	K	M	G	A	D	H	Y	I	A	T	L	E	E	G	D	W	G	E	K	Y	F	D	T	F	D
Template Known Secondary structure									T	T		S	T	T									S														T	.								S	S	S	T	T								T		S					G	G	G	T	S						S		S
Template Predicted Secondary structure																																						.
Template SS confidence
	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

	229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence	P	T	L	I	I	D	A	A	C	H	P	S	I	L	K	E	A	V	T	L	A	S	P	A	A	R	I	V	L	M	G	F	S	S	E	P	S	E	V	I	Q	Q	G	I	T	G	K	E	L	S	I	F	S	S	R	L	N	.	A	N	K	F	P	I	V	I	D	W	L	S	K	G	L	I	K	P	E	K	L	I
Query Conservation																																																										.
Alig confidence																																																										.																				.	.
Template Conservation																																																																														.	.
Template Sequence	L	I	V	V	C	A	S	S	L	T	D	I	D	F	N	I	M	P	K	A	M	K	V	G	G	R	I	V	S	I	S	I	P	E	Q	H	E	M	L	S	L	K	P	Y	G	L	K	A	V	S	I	S	Y	S	A	L	G	S	I	K	E	L	N	Q	L	L	K	L	V	S	E	K	D	I	K	I	W	.	.	V
Template Known Secondary structure							S		S	T	T			T	T	T	G	G	G	G															S	S							G	G	G		S	S																								T	T					.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
	246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.

	308	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence	T	H	T	.	F	D	F	Q	H	V	A	D	A	I	S	L	F	E	Q	D	Q	K	H	C	C	K	V	L	L	T	F	S	E
Query Conservation				.
Alig confidence				.																				.
Template Conservation																								.
Template Sequence	E	T	L	P	V	G	E	A	G	V	H	E	A	F	E	R	M	E	K	G	D	V	R	.	Y	R	F	T	L	V	G	Y	D
Template Known Secondary structure					S	S														T			S	.	S
Template Predicted Secondary structure																								.
Template SS confidence
	324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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