Job Description P38105 Confidence 100.00% Date Wed Jan 25 15:20:53 GMT 2012 Rank 12 Aligned Residues 334 % Identity 20% Template c1hf3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase e chain; PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	K	S	I	L	I	E	K	P	N	.	Q	L	A	I	V	E	R	E	I	P	T	P	S	A	G	E	V	R	V	K	V	K	L	A	G	I	C	G	S	D	S	H	I	Y	R	G	H	N	P	F	A	K	Y	P	R	V	I	G	H	E	F	F	G	V	I	D	A	V	G	E	G	V	E	S	A	R	V	G	E
Query Conservation												.
Alig confidence												.																																									.
Template Conservation																																																					.
Template Sequence		C	K	A	A	V	L	W	E	E	K	K	P	F	S	I	E	E	V	E	V	A	P	P	K	A	H	E	V	R	I	K	M	V	A	T	G	I	C	R	S	D	D	H	V	V	S	G	T	L	V	T	.	P	L	P	V	I	A	G	H	E	A	A	G	I	V	E	S	I	G	E	G	V	T	T	V	R	P	G	D
Template Known Secondary structure							B		S	T	T	S														T	T																					T	S	S			.		S	S	B					S										T	T			S			T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	V	D	P	V	V	S	C	G	H	C	Y	P	C	S	I	G	K	P	N	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	L	A	V	L	G	V	H	A	D	G	G	F	S	E	Y	A	V	V	P	A	K	N	A	W	K	I	P	E	A	V	A	D	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	I	P	L	F	T	P	Q	C	G	K	C	R	V	C	K	H	P	E	G	N	F	C	L	K	N	D	L	S	M	P	R	G	T	M	Q	D	G	T	S	R	F	T	C	R	G	K	P	I	H	H	F	L	G	T	S	T	F	S	Q	Y	T	V	V	D	E	I	S	V	A	K	I	D	A	A	S	P	L	E
Template Known Secondary structure							S	S				S		S					S	S	S					T	T		S	S	S	S				S		T	T	S			S				T	T				B		S	T	T	T			S	B	S						G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		139		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.
Predicted Secondary structure			.																																																																											.	.	.
Query SS confidence			.																																																																											.	.	.
Query Sequence		Y	.	A	V	M	I	E	P	F	T	I	A	A	N	V	T	G	H	G	Q	P	T	E	N	D	T	V	L	V	Y	G	A	G	P	I	G	L	T	I	V	Q	V	L	K	G	V	Y	N	V	K	N	V	I	V	A	D	R	I	D	E	R	L	E	K	A	K	E	S	G	A	D	W	A	I	N	N	.	.	.	S
Query Conservation			.																																																																											.	.	.
Alig confidence			.																																																																											.	.	.
Template Conservation
Template Sequence		K	V	C	L	I	G	C	G	F	S	T	G	Y	G	S	A	V	K	V	A	K	V	T	Q	G	S	T	C	A	V	F	G	L	G	G	V	G	L	S	V	I	M	G	C	K	A	A	G	A	A	R	I	I	G	V	D	I	N	K	D	K	F	A	K	A	K	E	V	G	A	T	E	C	V	N	P	Q	D	Y	K
Template Known Secondary structure				G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G								T		S					G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.
Predicted Secondary structure																																																		.	.																								.	.	.	.
Query SS confidence																																																		.	.																								.	.	.	.
Query Sequence		Q	T	P	L	G	E	I	F	T	E	K	G	I	K	P	T	L	I	I	D	A	A	C	H	P	S	I	L	K	E	A	V	T	L	A	S	P	A	A	R	I	V	L	M	G	F	S	S	.	.	E	P	S	E	V	I	Q	Q	G	I	T	G	K	E	L	S	I	F	S	S	R	L	N	.	.	.	.	A	N	K
Query Conservation																																																		.	.																								.	.	.	.
Alig confidence																																																		.	.																								.	.	.	.
Template Conservation
Template Sequence		K	P	I	Q	E	V	L	T	E	M	S	N	G	G	V	D	F	S	F	E	V	I	G	R	L	D	T	M	V	T	A	L	S	C	C	Q	E	A	Y	G	V	S	V	I	V	G	V	P	P	D	S	Q	N	L	S	M	N	P	M	L	L	L	S	G	R	T	W	K	G	A	I	F	G	G	F	K	S	K	D	S
Template Known Secondary structure		S											T	S		B	S						S													B		T	T	T							S				T	T							T					T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	I	V	I	D	W	L	S	K	G	L	I	K	P	E	K	L	I	T	H	T	F	D	F	Q	H	V	A	D	A	I	S	L	F	E	Q	D	Q	K	H	C	C	K	V	L	L	T	F
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		V	P	K	L	V	A	D	F	M	A	K	K	F	A	L	D	P	L	I	T	H	V	L	P	F	E	K	I	N	E	G	F	D	L	L	R	S	G	E	S	.	.	I	R	T	I	L	T	F
Template Known Secondary structure											T	T	S	S			G	G	G							G	G	G										T	T			.	.	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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