Return to main results Retrieve Phyre Job Id

Job DescriptionP23538
Confidence28.58%DateThu Jan 5 11:39:36 GMT 2012
Rank130Aligned Residues46
% Identity20%Templated1vc1a_
SCOP infoSpoIIaa-like SpoIIaa-like Anti-sigma factor antagonist SpoIIaa
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   724.....730.........740.........750.........760.........770...
Predicted Secondary structure 

















Query SS confidence 

















































Query Sequence  DERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSL
Query Conservation      



 

   
  
      
 



     
     
  


   
Alig confidence 





























....















Template Conservation    





  
               
   ....   
   
   
    
Template Sequence  SYMDSAGLGTLVVILKDAKINGKEFILSSL. . . . KESISRILKLTHLDKI
Template Known Secondary structure 

B
TT
S
....
TGGGT
Template Predicted Secondary structure 






....




Template SS confidence 

















































   55....60.........70.........80.... .....90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions