Job Description P23538 Confidence 100.00% Date Thu Jan 5 11:39:36 GMT 2012 Rank 12 Aligned Residues 279 % Identity 25% Template d1vbga3 SCOP info ATP-grasp Glutathione synthetase ATP-binding domain-like Pyruvate phosphate dikinase, N-terminal domain Resolution 2.30

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		7	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																																			.	.	.	.	.
Query SS confidence									.	.	.	.																																																			.	.	.	.	.
Query Sequence		S	P	L	V	L	W	Y	.	.	.	.	N	Q	L	G	M	N	D	V	D	R	V	G	G	K	N	A	S	L	G	E	M	I	T	N	L	S	G	M	G	V	S	V	P	N	G	F	A	T	T	A	D	A	F	N	Q	F	L	D	Q	S	.	.	.	.	.	G	V	N	Q	R	I	Y	E	L	L	D	K	T	D
Query Conservation									.	.	.	.																																																			.	.	.	.	.
Alig confidence									.	.	.	.																						.	.	.	.																										.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		K	K	R	V	F	H	F	G	K	G	K	S	E	G	N	K	T	M	K	E	L	L	G	G	K	G	A	N	L	A	E	M	.	.	.	.	A	S	I	G	L	S	V	P	P	G	F	T	V	S	T	E	A	C	Q	Q	Y	Q	D	A	G	C	A	L	P	A	G	L	W	A	E	I	V	D	G	L	Q	W	V	E
Template Known Secondary structure				S						T	T			S	S		T	T		T	T	T	T											.	.	.	.			T	T																				T	T	S				T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	D	V	T	Q	L	A	K	A	G	A	Q	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	I	I	D	T	P	F	Q	P	E	L	E	N	A	I	R	E	A	Y	A	Q	L	S	A	D	D	E	N	A	S	F	A	V	R	S	S	A	T	A	E	D	M	P	D	A	S	F	A	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	M	G	A	T	L	G	D	P	Q	R	P	L	L	L	S	V	R	S	G	A	A	V	S	M	P	G	M	M	D	T	V	L	N	L	G	L	N	D	E	V	A	A	G	L	A	A	K	S	G	E	R	F	A	Y	D	S	F	R	R	F	L	D	M	F	G	N	V	V	M	D	I	P	R	S	L	F	E	E
Template Known Secondary structure					T		B	T	T		S	S	S	B										S	S			T	T									T																																	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.																																				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	E	T	F	L	N	V	Q	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	V	L	V	A	V	K	H	V	F	A	S	L	F	N	D	R	A	I	S	Y	R	V	H	Q	G	Y	D	H	R	G	V	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																																																																														.
Template Sequence		K	L	E	H	M	K	E	S	K	G	L	K	N	D	T	D	L	T	A	S	D	L	K	E	L	V	G	Q	Y	K	E	V	Y	L	S	A	K	G	E	P	F	P	S	D	P	K	K	Q	L	E	L	A	V	L	A	V	F	N	S	W	E	S	P	R	A	K	K	Y	R	S	I	N	Q	I	T	G	.	L	R	G
Template Known Secondary structure											T		S	S	G	G	G																						S	S																					T	T										T	T	T				.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.
		188	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		L	S	A	G	V	Q	R	M	V	R	S	.	.	.	D	L	A	S	S	G	V	M	F	S	I	D	T	E	S	G	F	D	Q	V	V	F	I	T	S	A	W	G	L	G	E	M	V	V	Q	G	A	V	N	P	D	E	F	Y	V	H	K	P	T	L	A	A	N	R	P	A	I	V	R	R	T	M	G	S	K	K
Query Conservation													.	.	.
Alig confidence													.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	V	N	V	Q	C	M	V	F	G	N	M	G	N	T	S	G	T	G	V	L	F	T	R	N	P	N	T	G	E	K	K	L	Y	G	E	F	L	V	N	A	Q	G	E	D	V	V	A	G	I	R	T	P	E	D	L	D	A	M	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S		S	S	T	T								S	S		T	T	T			S	S								S	S								T	S						T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	M	V	Y	A	P	T	Q	E	H	G	K	Q	V	K	I	E	D	V	P	Q	E	Q	R	D	I	F	S	L	T	N	E	E	V	Q	E	L	A	K	Q	A	V	Q	I	E	K	H	Y	G	R	P	M	D	I	E	W	A	K	D	G	H	T	G	K	L	F	I	V	Q	A	R	P	E	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	P	Q	A	Y	D	E	L	V	E	N	C	N	I	L	E	S	H	Y	K	E	M	Q	D	I	E	F	T	V	Q	.	.	E	N	R	L	W	M	L	Q	C	R	T	G	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						S										.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
																															300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions