Return to main results Retrieve Phyre Job Id

Job DescriptionP23538
Confidence45.42%DateThu Jan 5 11:39:36 GMT 2012
Rank103Aligned Residues141
% Identity14%Templated1rpxa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   629630.........640.........650.........660.........670.........680.........690.........700........
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  VKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQL
Query Conservation 
 

        
 

 


    
                     

 








         

 








 
Alig confidence 





















.












.......

































...
Template Conservation   
     



 
 
       .             .......
    
        
         
 
       ...
Template Sequence  RVPDFIKAGADIVSVHCEQSST. IHLHRTINQIKSL. . . . . . . GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNP. . .
Template Known Secondary structure  TT
S
STTT
.S
T.......TS
TT

GGGGTTTTTT
SSS
T...
Template Predicted Secondary structure 





.
.......









...
Template SS confidence 















































































   83......90.........100.... .....110....... ..120.........130.........140.........150.
 
   709710.........720.........730.........740.........750.........760.........770.........780 ......
Predicted Secondary structure 























..
Query SS confidence 







































































. .





Query Sequence  ALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTV. . VQTWLS
Query Conservation   

 

    
        



 

   
  
      
 



     
     
  


   
  
  
..   
  
Alig confidence  ...........





































.





















..





Template Conservation  ...........
             
  
            
   


 . 
 
      


 






    

   
Template Sequence  . . . . . . . . . . . GFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG. PKNAYKVIEAGANALVAGSAVFGAPDYAEA
Template Known Secondary structure  ...........T
SS



TTT


SS

.TTTT

STSS
Template Predicted Secondary structure  ...........



















.







Template SS confidence 















































































   152.......160.........170.........180......... 190.........200.........210.........
 
   787..790..
Predicted Secondary structure 

Query SS confidence 





Query Sequence  LAELKK
Query Conservation 
     
Alig confidence 





Template Conservation     

 
Template Sequence  IKGIKT
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions