 |
Job Description | P23538 | Confidence | 21.17% | Date | Thu Jan 5 11:39:36 GMT 2012 |
Rank | 154 | Aligned Residues | 72 |
% Identity | 24% | Template | d1lt7a_ |
SCOP info | TIM beta/alpha-barrel
| Homocysteine S-methyltransferase
| Homocysteine S-methyltransferase
|
Resolution | 2.15 |
|
 |
  |   |
619 | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 690 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | C | F | A | L | E | C | E | A | V | K | R | V | R | N | D | M | G | L | T | N | V | E | I | M | I | P | F | V | R | T | V | D | Q | A | K | A | V | V | E | E | L | A | R | Q | G | L | K | R | G | E | N | G | L | K | I | I | M | M | C | E | I | P | . |
. |
. |
. |
. |
. |
. |
S | N | A | L | L | A | E | Q | F |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   | . | . | . | . | . | . |
|   |   |
|
|   |   |   |   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
K | K | V | F | L | Q | Q | L | E | V | F | M | K | K | N | V | D | F | . |
. |
. |
. |
. |
. |
L | I | A | E | Y | F | E | H | V | E | E | A | V | W | A | V | E | T | L | . |
. |
. |
. |
. |
. |
. |
I | A | S | G | K | P | V | A | A | T | M | A | I | G | P | E | G | D | L | H | G | V | P | P | G | E | A | A | V | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  | . | . | . | . | . | . |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | G | G | G | S | S |
|  |  |  |  |  |
|
| B | T | T | B | S | T | T | S |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
692 | . | . | . | . | . | . | . | 700 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | Y | F | D | G | F | S | I | G | S | N |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
L | V | K | A | G | A | S | I | I | G | V | N |
Template Known Secondary structure |   |
 |  |  | T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|