|   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | M | E | R | Y | T | L | H | S | Q | G | K | I | I | A | E | G | R | A | I | G | H | R | I | G | A | G | P | V | K | V | I | H | D | . |
I | S | E | M | N | R | I | E | P | G | D | V | L | V | T | D | M | T | D | P | D | W | E | P | I | M | K | K | A | S | A | I | V | T | N | R | G | G | R | T | C | H | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
H | P | T | F | N | P | A | A | L | K | A | G | E | V | I | G | S | A | L | P | A | S | P | G | A | A | A | G | K | V | Y | F | T | A | D | E | A | K | A | A | H | E | K | G | E | R | V | I | L | V | R | L | E | T | S | P | E | D | I | E | G | M | H | A | A | E | G | I | L | T | V | R | G | G | M | T | S | H | A | A |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  | S |
|  |  |  |  |
|  |  |  |  |
| S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | S |
|
| G | G | G |  |  |  |  |  |  |
| S |  |  |  |  | S | S |
|
| T | T | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . |
  |
  |   |
424 | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | A | R | E | L | G | I | P | A | V | V | G | C | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | T | E | R | M | K | D | G | E | N | V | T | V | S | C | A | E | G | D | T | G | Y | V | Y | A | E |
Query Conservation |   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
| . | . | . |
|
|   |   |
|   |
|   |   |
|
Template Sequence |   |
V | V | A | R | G | M | G | T | C | C | V | S | G | C | G | E | I | K | I | N | E | E | A | K | T | F | E | L | G | G | H | T | F | A | E | G | D | Y | I | S | L | . |
. |
. |
D | G | S | T | G | K | I | Y | K | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|  |  |  |  |
|
| T | T |
|  |  |  | T | T | T | T |  |  |  |  | T | T |  |  |  |  | T | T |
|  |  |  |  | . | . | . |  | T | T | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | |
|
|
. | 500 | . | . | . | . | . | . | . | . |
  |